Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0979 ATGGCACATGTAATGTCGAATAGAGAGGCTATGACAGAAGATCATCAACCAATTACGAATGGTGATAGTGATGGATTAGAGAAAAATAAAATTATTGACATACACAATAGACTTCCAAATGAAATGATACCACAACTTGGGTTGGAATTTGAAACTGATGATGCGACTTATGATTTTTATAACTCTTATGCTTATAGAGTTGGTTTTAGTGTGAGGAAAAGTAAAGCACACAACAATGCTGATGGTCACATAATTGATAGAGTATTTTGTTGTTCATGTGAAGGTTATCGTGAGAAGGATAAACGAAGCACTAGTGTGAATAATCCCCGTGCTCAATCAAGGTTTGGATGTTTGGCAAGAATGAAAGTAGATTGTCATTCAACAGGAAAATTTTGTATTGTTCAATTTATTGATAAATCTCATAGGAAAATAACACCCTCTCTAGCATATGAGATTGACTTAGCTGAAAGTTCTGGTATTGCTCCAAAAGCAAGTTGTGAATTAATGGCAAGAAGAGTTGAAGGACGTGAAAACTTGGGATTCATTCATGATGACTATAAAAATTATTTACGCTCAAAGCGAACAATTCAAATGAGATTAGGAGATACAGGTGGTTTGCTTGAGTATTTACAACAAATGAAAGTAGAAGATCCTAATTTTTTCTACACCATACAAGTTGATGAGGATGATTTAATAACCAATATATTTTGGAGAGATGCAAAAATGATGGTTGAGTATTCATATTTTGGTGATGTTGTTTGTTCTGATACCACATATAGAAAAAATAAAGAAGGTCGTCCATTTGCCATGTTTATTGGAGTGGATCATCATAAACTTAGCACTATCTTTGGTGCAGCATTGTTATATGATGAAACTGCAAAAACATTTGTTTGGTTGTTCGAAACTTTAGCTACAACAATGTCAGGAAAAAAGCCACAAACTATACTCACTGACCAAGATGCAGCAATGGCGAAGGCTCTAAGCTTGACATGGCCAGAGACATCCCACCGCCTTTGTATTTGGCACTTATACCAGAATGCTTTGAAGAATCTTAGTGTTGTATTTGGAGAGTTTCAAGACTTCAATAAGAACTTCAGCAAGTGCATATATGAGTATGAAGAAGAAGACGAGTTTATTAAAGCTTGGGATGATTTGCTAGACAACTATGGTCTTCGTGGTAATAAATGGATGAATCAAACATTTGCTTTGAAGGAAAAAAGGGCTTTAGTTTATGGTCGACAAAATTTTTATACTGATATGATGACCACACAACGTAATGAGAGCACGAACAACGTCATAAAGAAATATCACTTTGAGAGGTTGGTTGATGATCGTCGATATCAACAGTTAAAGACAGATTTTAAAGCAACTCAAAGAAATGTGTCTTTGTCGTTTAATGTTGAGATTCATACTGTCAAATATGACTCAACTAATGGTGTCGTTACTTGTAGTTGTAAGAAGTTTGAGTTTGCAGGAATTTTATGCTCACATGTTCTCAAAGTTATTTCAATAAGAAATATAATGAGGATTCCTATGATATATGTGCTAAAGAGGTGGACAAAGCAAGCAAAAATTGGAAGTGATAGAGGGACATGTCTTAGTCCTACTAATGATGATGAAAAGGCGGGATTGAGAAATCGCTACAAGGATTTATGTGGGCGGTACACAGAATTAACAACAAAAGGTGCAACAAATGAAGAAACGTATAAAATTGTTGTCAATGCTTGGAATAAGGCTATGGAAGCTATAGATGCATGCATTGGAGGTGGAAAGAATGAGATGTACACCCATGACACATCACCCATTGGTATTGAAAATGTTTTGTGCATTGAGAGTGCTAATAATAAGGTGAAGGGAATCAAGACAAAAGGAAAACTTTGTGGATCATCTAGAAGGCCAAAAAGTATTCTTGAAAAAAAAACTTGTCTACAAGAAGATGAACCTTCTATACAAAACTTAGCTTTTCGATTGCCTCCATTTCAATCGTTTGAGACACAATTATCTAGTGTAGTTTGGCAAGACAATTGTGAAAACATGAATGAACAAGACACTCATCAAGTTCCAAGGACTCCTCGGACTCCTAGGACACCCAGAACACCTATGACTCCTATGAGTAAGATGGATTTGCTTCCACTTATCAAAGGTTCAAGACAAAGTTCTCTGTTTGCAGTTCAACACCTATAG 2184 0.3562 MAHVMSNREAMTEDHQPITNGDSDGLEKNKIIDIHNRLPNEMIPQLGLEFETDDATYDFYNSYAYRVGFSVRKSKAHNNADGHIIDRVFCCSCEGYREKDKRSTSVNNPRAQSRFGCLARMKVDCHSTGKFCIVQFIDKSHRKITPSLAYEIDLAESSGIAPKASCELMARRVEGRENLGFIHDDYKNYLRSKRTIQMRLGDTGGLLEYLQQMKVEDPNFFYTIQVDEDDLITNIFWRDAKMMVEYSYFGDVVCSDTTYRKNKEGRPFAMFIGVDHHKLSTIFGAALLYDETAKTFVWLFETLATTMSGKKPQTILTDQDAAMAKALSLTWPETSHRLCIWHLYQNALKNLSVVFGEFQDFNKNFSKCIYEYEEEDEFIKAWDDLLDNYGLRGNKWMNQTFALKEKRALVYGRQNFYTDMMTTQRNESTNNVIKKYHFERLVDDRRYQQLKTDFKATQRNVSLSFNVEIHTVKYDSTNGVVTCSCKKFEFAGILCSHVLKVISIRNIMRIPMIYVLKRWTKQAKIGSDRGTCLSPTNDDEKAGLRNRYKDLCGRYTELTTKGATNEETYKIVVNAWNKAMEAIDACIGGGKNEMYTHDTSPIGIENVLCIESANNKVKGIKTKGKLCGSSRRPKSILEKKTCLQEDEPSIQNLAFRLPPFQSFETQLSSVVWQDNCENMNEQDTHQVPRTPRTPRTPRTPMTPMSKMDLLPLIKGSRQSSLFAVQHL 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0979 727 Pfam SWIM zinc finger 482 503 IPR007527 GO:0008270
Lal11g0979 727 PANTHER OS03G0181600 PROTEIN 461 591 - -
Lal11g0979 727 PANTHER OS03G0181600 PROTEIN 34 460 - -
Lal11g0979 727 MobiDBLite consensus disorder prediction 680 705 - -
Lal11g0979 727 MobiDBLite consensus disorder prediction 1 26 - -
Lal11g0979 727 Pfam FAR1 DNA-binding domain 58 138 IPR004330 -
Lal11g0979 727 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 460 IPR031052 GO:0006355
Lal11g0979 727 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 461 591 IPR031052 GO:0006355
Lal11g0979 727 Pfam MULE transposase domain 252 346 IPR018289 -
Lal11g0979 727 ProSiteProfiles Zinc finger SWIM-type profile. 470 506 IPR007527 GO:0008270
Lal11g0979 727 SMART 26again6 481 508 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0979 Lal-Chr11 13223580 13227489 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0979 MULE 6.6e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0979 K17604 - fve:101305436 638.647