Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0962 ATGTTTCATCCGATTACGCCGAACCAGATGATGAACAAGAATAAGGATCATGATAAGAAGAACAAGAAGCCTCCTCGACTTGCTTGGTCCGAGGAGTTGCATCACAAGTTTGTTCATGTTGTTAATCTTTTAGGAATTGAGAATGCTGTACCTAGAAAAATTCTTGCTTTGATGAATGATGAAAGACTTACAAAGCAGAATGTGGCCAGTCATCTTCAGAAATATAAACTTTCTCTCAAAAGAATTAGCAGCAACTGTGTGCCAAGTGGAAATGGTTCTATAATTGGTTGTGGACAATTTCAGAATGTGTCTCCAAGTGATCCTGTTTATCAGAACGTTGCTGTTCAAGAAATGCCGATGTCAACATGGCATTCCGACGAAAGCCTTGATTCGTTGTTCAATGATGTGTTTTTGCAATGGTGGGAATACCATAATACAAACGCAACTGGCCTTTCAAATGTTATTGGTACCTCACCAAGCACACTGACTCCATTGATGGATGCTGTTAATAGTAATCTTGGATCAACACAAGACCTGGTTACTGTTGCATCTCCCAGCTGCATCTCGCACGAGTCGATCGAGATGGGAGAGCTGAGACAAGAGATTGCTGCAACCAGAACCGAGACTCGACAATTGAGGGAGACGGTCCAAGCATTGAAGGCACAACAGGACATGTTGGTGCAAGTTGTTTTACAGCTTCTCCCACCCAATGTGGTAATGCAACAATAG 729 0.4225 MFHPITPNQMMNKNKDHDKKNKKPPRLAWSEELHHKFVHVVNLLGIENAVPRKILALMNDERLTKQNVASHLQKYKLSLKRISSNCVPSGNGSIIGCGQFQNVSPSDPVYQNVAVQEMPMSTWHSDESLDSLFNDVFLQWWEYHNTNATGLSNVIGTSPSTLTPLMDAVNSNLGSTQDLVTVASPSCISHESIEMGELRQEIAATRTETRQLRETVQALKAQQDMLVQVVLQLLPPNVVMQQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0962 242 MobiDBLite consensus disorder prediction 1 24 - -
Lal11g0962 242 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 25 77 IPR006447 GO:0003677
Lal11g0962 242 Coils Coil 195 222 - -
Lal11g0962 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 182 IPR045279 GO:0009736
Lal11g0962 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 80 IPR017930 -
Lal11g0962 242 SUPERFAMILY Homeodomain-like 23 81 IPR009057 -
Lal11g0962 242 Gene3D - 20 83 - -
Lal11g0962 242 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 182 - -
Lal11g0962 242 Pfam Myb-like DNA-binding domain 27 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0962 Lal-Chr11 12975815 12978463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0962 22 170 Response Regulator Gene Family AT5G58080 38.415 7.65e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal11g0962 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0962 - K14491 lang:109344458 327.02