Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0960 ATGATGAATACGAATAAGGATCATGATAAGAAGAACAAGAAGCCTCCTCGACTTGCTTGGTCGGAGGAGTTGCACCGCAAGTTTGTTCATGTTGTTAATCTTTTAGGAATTGAGAATGCTATACCTAGAAAAATTCTTGCTTTGATGAATGATGAAAGACTTACAAAGCAGAATGTGGCCAGTCATCTTCAGAAATATAAACTTTCTCTCAAAAGAATTAGCAGCAACTGTGTGCCAAGTGGAAATGGTTCTAAAATTGGTTGTGTACAATTTCAGAATGTTTCTCCAAGTGATCCTGTTTATCAGAACGCTGCTGTTCAAGAAATGCCGATGCCAACATGGCATTCCGACGAAAGCCTTGATTCGTTGTTCGATGATGTGTTTTTGCAATGGTGGGAAGACCATAATACGGACGCAACTGACCTTTCAAATGTTATTGGTACCTCACCAAACACACTGACTCCATTGATGGATGTTGTTAATAGTAATCTTGGATCAACACAAGACTTGCTTACTGTTGCATCTCCCAGCTGCATCTCCCACGAGTCGATCGAGATCGGAGAGCTGAGACAAGAGATTGCTGCAACCAGAACCGAGACTCATCAATTAAGGGAGACGATCCAAGCATTGAAGGCACAACAGGACATGTTGGTGCAAGTTGTTCTACAACTTCTCCCACCCAATGTGGTAATGCAACAATAG 702 0.4174 MMNTNKDHDKKNKKPPRLAWSEELHRKFVHVVNLLGIENAIPRKILALMNDERLTKQNVASHLQKYKLSLKRISSNCVPSGNGSKIGCVQFQNVSPSDPVYQNAAVQEMPMPTWHSDESLDSLFDDVFLQWWEDHNTDATDLSNVIGTSPNTLTPLMDVVNSNLGSTQDLLTVASPSCISHESIEIGELRQEIAATRTETHQLRETIQALKAQQDMLVQVVLQLLPPNVVMQQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0960 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 107 - -
Lal11g0960 233 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 16 68 IPR006447 GO:0003677
Lal11g0960 233 SUPERFAMILY Homeodomain-like 14 72 IPR009057 -
Lal11g0960 233 Pfam Myb-like DNA-binding domain 18 67 IPR001005 -
Lal11g0960 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 71 IPR017930 -
Lal11g0960 233 Coils Coil 186 213 - -
Lal11g0960 233 Gene3D - 11 74 - -
Lal11g0960 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 107 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0960 Lal-Chr11 12935999 12969790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0960 13 161 Response Regulator Gene Family AT5G58080 35.542 7.11e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal11g0960 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0960 - K14491 lang:109344458 331.643