Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0944 ATGGCAACAAATGCTCACAACCACCTCACACAAGAGACCCATGATGCTACATTGAGTGCATTATCTGAAAATAACTACCTCAACCTACACGCATTGTTCCTATGTGTCCACGTCTGTCGCCGCCGCCGTCGCTTATTACAACACCCTGCCACCGACGCCGCAGACGCCGCGGTTGTGATCTCTCAGCTACCAGCTCATGAATGTGTTATAGTTTATTACACCAACCACAACATGGTCCCATGTTCAACTACTACCAAGAGTCTTAGCTTGGTTGGTGAAGGTTTAGAGAAGAAGGAATGTTGCATATGTTTGAGTCATTTCAAAGATAATGAAAAGCTGAAGTGGTTAACAGAATGTGAGCATGTTTATCATTCTGAGTGCTTGGACATGTGGCTTGGTGCAAATTGTAGCTGTCCTCTCTGCAGGTCCTCCCTCCATGTTAGTGATGATCCTCTCAAGAAATCTATCATTTCTTCGTAA 480 0.4479 MATNAHNHLTQETHDATLSALSENNYLNLHALFLCVHVCRRRRRLLQHPATDAADAAVVISQLPAHECVIVYYTNHNMVPCSTTTKSLSLVGEGLEKKECCICLSHFKDNEKLKWLTECEHVYHSECLDMWLGANCSCPLCRSSLHVSDDPLKKSIISS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0944 159 SMART ring_2 100 141 IPR001841 -
Lal11g0944 159 Pfam Ring finger domain 98 142 IPR001841 -
Lal11g0944 159 PANTHER RING-H2 FINGER PROTEIN ATL66 72 150 - -
Lal11g0944 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 145 IPR013083 -
Lal11g0944 159 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 72 150 IPR044675 -
Lal11g0944 159 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Lal11g0944 159 SUPERFAMILY RING/U-box 94 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0944 Lal-Chr11 12763092 12763852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0944 79 145 C3H Transcription Factor Family AT1G04360 40.000 6.49e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0944 - K10664 lja:Lj0g3v0098519.1 129.028