Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal11g0944 | ATGGCAACAAATGCTCACAACCACCTCACACAAGAGACCCATGATGCTACATTGAGTGCATTATCTGAAAATAACTACCTCAACCTACACGCATTGTTCCTATGTGTCCACGTCTGTCGCCGCCGCCGTCGCTTATTACAACACCCTGCCACCGACGCCGCAGACGCCGCGGTTGTGATCTCTCAGCTACCAGCTCATGAATGTGTTATAGTTTATTACACCAACCACAACATGGTCCCATGTTCAACTACTACCAAGAGTCTTAGCTTGGTTGGTGAAGGTTTAGAGAAGAAGGAATGTTGCATATGTTTGAGTCATTTCAAAGATAATGAAAAGCTGAAGTGGTTAACAGAATGTGAGCATGTTTATCATTCTGAGTGCTTGGACATGTGGCTTGGTGCAAATTGTAGCTGTCCTCTCTGCAGGTCCTCCCTCCATGTTAGTGATGATCCTCTCAAGAAATCTATCATTTCTTCGTAA | 480 | 0.4479 | MATNAHNHLTQETHDATLSALSENNYLNLHALFLCVHVCRRRRRLLQHPATDAADAAVVISQLPAHECVIVYYTNHNMVPCSTTTKSLSLVGEGLEKKECCICLSHFKDNEKLKWLTECEHVYHSECLDMWLGANCSCPLCRSSLHVSDDPLKKSIISS | 159 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal11g0944 | 159 | SMART | ring_2 | 100 | 141 | IPR001841 | - | |
Lal11g0944 | 159 | Pfam | Ring finger domain | 98 | 142 | IPR001841 | - | |
Lal11g0944 | 159 | PANTHER | RING-H2 FINGER PROTEIN ATL66 | 72 | 150 | - | - | |
Lal11g0944 | 159 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 145 | IPR013083 | - | |
Lal11g0944 | 159 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 72 | 150 | IPR044675 | - | |
Lal11g0944 | 159 | ProSiteProfiles | Zinc finger RING-type profile. | 100 | 142 | IPR001841 | - | |
Lal11g0944 | 159 | SUPERFAMILY | RING/U-box | 94 | 148 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal11g0944 | Lal-Chr11 | 12763092 | 12763852 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal11g0944 | 79 | 145 | C3H Transcription Factor Family | AT1G04360 | 40.000 | 6.49e-14 | 66.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal11g0944 | - | K10664 | lja:Lj0g3v0098519.1 | 129.028 |