Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0938 ATGAAGAGACCTACAAAGCTTGATATACCCGTTGTTGCATCTCTCACAGTTGGGGTGCAGGATGCGGCGGTGACAATGGCGGCGGAGAGGGACATGGTGGAGGTAGAGGGGCGTGGTTTTGCTGTTTACTGTAGGAGAGGAAGGAGGGAACACATGGAAGACCATTACTCTGCTTCCGTTGATCTTCATGGACAACCCAAAGAGGGTGACTATGTTGATATATATCATGGTGTTTGGAGGATCCAAGGATCCTTGACTGTTTCTAGAGGAATTGAACCTGAGACCAAAGTACTCGGAATTGAACCTGCACATAACTTATTAATCTTAGCATCCCACGGATTATGGGAAAAGGTTAGTAATCAAGAAGCGGTAGATTTTTGTCGTCCATTTTGTATTGGGAGCAATAAACAACAACCATTGTTAGCTTGTAAAAAACTTGTAGACTTATATGTATCACGAGGCTCCGTCGATGATATAAGTGTCATAATAATCAAATTACAACACTATATTTGA 513 0.425 MKRPTKLDIPVVASLTVGVQDAAVTMAAERDMVEVEGRGFAVYCRRGRREHMEDHYSASVDLHGQPKEGDYVDIYHGVWRIQGSLTVSRGIEPETKVLGIEPAHNLLILASHGLWEKVSNQEAVDFCRPFCIGSNKQQPLLACKKLVDLYVSRGSVDDISVIIIKLQHYI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0938 170 Pfam Protein phosphatase 2C 92 159 IPR001932 -
Lal11g0938 170 PANTHER PROTEIN PHOSPHATASE 2C 68 169 IPR015655 GO:0004722|GO:0006470
Lal11g0938 170 PANTHER PROTEIN PHOSPHATASE 2C 2 68 IPR015655 GO:0004722|GO:0006470
Lal11g0938 170 CDD PP2Cc 41 166 IPR001932 -
Lal11g0938 170 Gene3D - 63 169 IPR036457 -
Lal11g0938 170 ProSiteProfiles PPM-type phosphatase domain profile. 1 166 IPR001932 -
Lal11g0938 170 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 2 68 - -
Lal11g0938 170 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 68 169 - -
Lal11g0938 170 SUPERFAMILY PP2C-like 67 167 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0938 Lal-Chr11 12684622 12688049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0938 2 77 PP2C-type Phosphatase Gene Family AT1G07160 46.053 2.93e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0938 K17506 - gmx:100818903 165.622