Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0937 ATGGCTTTCTCAGTTTCCAATTCTCCTGTCTACTCTCTCTTCCCTAACAAAAACTCAATCATTTCTTCTTCCTCAGAACCTCTCACGTTCCCTCTTCCTCTTCTCCCTTCAACGACGTCGTCTTGCTCCTTACCCTCTTCACCTTCTTCATCGTCGTTGGCGTTGAAGAGACCTGCAAAGCTTGATATACCCGTTGTTGCATCTCTCACAGTTGGGGTGCAGGATGTGGCCGTGCCAATGGCGGCGGAGAGGGACATGGTGGAGGTGGAGGGGCGTGGTTTTGCTGTTTACTGTAAGAGAGGAAGGAGGGAACACATGGAAGACCGTTACTCTGCTGCCGTTGATCTTCATGGAGAACCCAAACAGGGTTTTTTCGGCATATATGATGGGCATGGAGGTACGAAAGCTTCAGAATTTGCTGCCCATAACTTAGAAAAGAATGTGATGGATGAAGTTGTAAGTAGAAATGAAAGTGATATTGAAGAAGCAGTGAAGTGTGGTTACCTCAACACAGATTCTGATTTCTTAAAAGAGAATATTAATGGTGGCTGTTGTTGTGTAACAACATTGATTAGGAATGGTAACCTTATTGTGTCCAATGTTGGTGACTGTCGTGCTGTCATTAGCAGAGAAGGTGTAGCGGAAGCACTCACATCTGATCATCGACCTTCAAGGGAAGATGAAAGAGAGAGAATTGAAACTCAAGGTGGCTATGTTGATATATTTCATGGTGTTTGGAGGATCCAAGGATCCTTGGCTGTTTCTAGAGGAATTGGTGATAGACACCTGAAACAATGGGTTATAGCAGAACCTGAGACCAATGTACTCAGAATTGAACCACCACATGACTTATTAATCTTAGCATCAGACGGATTATGGGAAAAGGTTAGGAATCAAGAAGCGGTAGATTTTTGTCGTCCATTTTGTATTGGGAGCAATAAACAACAACCATTGTTAGCTTGTAAAAAGCTTGTAGACTTATCTGTATCACGAGGCTCATTCGATGATATAAGTGTCATGATAATCAAATTACAACACTATATTTGA 1047 0.4269 MAFSVSNSPVYSLFPNKNSIISSSSEPLTFPLPLLPSTTSSCSLPSSPSSSSLALKRPAKLDIPVVASLTVGVQDVAVPMAAERDMVEVEGRGFAVYCKRGRREHMEDRYSAAVDLHGEPKQGFFGIYDGHGGTKASEFAAHNLEKNVMDEVVSRNESDIEEAVKCGYLNTDSDFLKENINGGCCCVTTLIRNGNLIVSNVGDCRAVISREGVAEALTSDHRPSREDERERIETQGGYVDIFHGVWRIQGSLAVSRGIGDRHLKQWVIAEPETNVLRIEPPHDLLILASDGLWEKVRNQEAVDFCRPFCIGSNKQQPLLACKKLVDLSVSRGSFDDISVMIIKLQHYI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0937 348 SMART PP2C_4 83 342 IPR001932 -
Lal11g0937 348 Pfam Protein phosphatase 2C 95 336 IPR001932 -
Lal11g0937 348 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lal11g0937 348 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 4 347 - -
Lal11g0937 348 Gene3D - 86 348 IPR036457 -
Lal11g0937 348 PANTHER PROTEIN PHOSPHATASE 2C 4 347 IPR015655 GO:0004722|GO:0006470
Lal11g0937 348 SUPERFAMILY PP2C-like 93 345 IPR036457 -
Lal11g0937 348 ProSiteProfiles PPM-type phosphatase domain profile. 93 344 IPR001932 -
Lal11g0937 348 CDD PP2Cc 92 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0937 Lal-Chr11 12673434 12676066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0937 2 348 PP2C-type Phosphatase Gene Family AT1G07160 57.784 6.39e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0937 K17506 - gmx:100813073 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0937 11 12673434 12676066 Lal11g0937 11 12673434 12676066 ECH
Lal11g0937 11 12673434 12676066 Lal18g1242 18 15119142 15121475 PCT
Lal11g0937 11 12673434 12676066 Lal22g0351 22 2252511 2254903 PCT
Lal11g0937 11 12673434 12676066 Lal6g0376 6 2397560 2400410 PCT
Lal18g1242 18 15119142 15121475 Lal11g0937 11 12673434 12676066 PCT
Lal22g0351 22 2252511 2254903 Lal11g0937 11 12673434 12676066 PCT
Lal6g0376 6 2397560 2400410 Lal11g0937 11 12673434 12676066 PCT