Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0909 ATGTGTGTCGAAGAACCAGAGAAATTGGTCAATAGTATTCATGAGAATATCTTGGAACAAGTAGAAGAGAATGTCATTGACTCTACACCACACTTGGGAATGAAGTTTGAATCGGAGGTTGCCGCCTATGATTTTTATAATGAGTACAGTCGAAAATGTGGTTTTGAATATGCAAATAAAAGTAGAAAAGATGGAGTTGTGACTTCAAGAAAATTCACATGCTCCAAAGAAGGAAAACGGGGTGTCGACAAACGAGACCACTTGACAAAACAGTCAAGAGCAGAAACCAGAACAGGATGTGAAGCACATATGGTTATTTCACTTGACCGAAATATTAATAAATACAATGTTGTGGGATTTGTTGCTGAACATAATCATCCTCTTCAACCACCTGCATATGTTCACATGATTCGCTCTCATCGACATATATCTGATTCACAAGCTTCACAAATTGAAATGGCAGATAATTCAGGATTAAGGCCAAAAGACTTTCATGAGTTTGTGTCCAAGCAAGCAGGTGGAATAGAAATTCTTGGTTATACCAAAAAAGACGGTAAGAATTACCTTCGAACCAAAAGAATGCAATCCTTAAGGTATGGTGAAGTGGGTGCGTTGTTGATGTATTTCAAACGTCGAAGTGAAAATCCATCATTCTTTTATGACTTTCAAATGGATGTTGAAGACCAAATAACAAATATATTTTGGGCAGATGCACAAATGATCAATGATTATGAGTACTTTGGAGATGTTGTCACTTTTGACACTACGTACAAGACAAATAAGGATTATCGACCTTTGGGAGTATTCATTGGGCTTAATAATCATAGGCAAACTGTTATTTTTGGGGCAACATTGTTATATGATGAAACAATTCCTTCTTTTCAATGGTTGTTTCAAACTTTTCTCAAGGCAATGGGTGGTGAAAATCCTAAAACCATTCTAACGGATCAATATGTTGCAATGGGCCAAGCCATTTCTTTAGTTATGCCAAACACATTCCATGGGTTATGCACTTGGCATATAAGACAAAATGCCCTAAGGCATGTGAATCATCTATATCAAAATGGTTCTACATTTTGCTTAGAGCTTGAAGCATGCATTGATCTACATGAAGATGAAAGTGAATTTTTGAATGCATGGCAAGAGTTAATTGAGAATCACAAAGTTCCTGCTGACTCATGGCTACACACAATTTTTAAAGTCAAGGAAAAATGGGTGTGGGCTTATGTTCGTAAAACTTTCACTGCAGGTATGAGAACTACTCAATTAAGTGAGAGCTTCAATGCTGCTTTGAAAAACCATTTGAAATCAGATTTGCATTTGGTACAATTTTTTACACACTTTGAGAGGGTTGTAAATGGGAAAAGAAACAATGAGTCAGAAGCTGAGTATGAATCAATAAATAAGCTTCCTAGATTGAAAATGTTGAAGGCCCCAATGCTTGTACAAACATCAAAGATTTACACTCCAAGAATTTTTGAGGAATTCCAAGAGGAATACGAAGAATATCAAGGCACTTGTATAAAAGAATTGAAACAAGGGTTGTATATTGTTACAAGTTATGATAATAGTCATGAGAGAAGAGTAATGGGGAATCTTGTGGATCAAAAGGTTGCTTGTGATTGTCGTAAATTTGAGACACATGGTATCTTATGTAGTCATGCTTTGAAAGTTTTGGATGTGATGAATATTAAGATAATTCCTCTACACTATATACTGAAGCGATGGACAAGAGAGGCAAGGGTTGGAATGAATCAAGATTGGAAAACACAACATATTGAGCTAGACATAAAAGCTAATTTTATGAACCGGTACAATGACTTATGTCCTCGAGTGCTTAATACAACAAAAAGATCGTGTGTGTCTCATGCTACCTATACTTTTTGGTCAAAAGTTTAA 1899 0.3591 MCVEEPEKLVNSIHENILEQVEENVIDSTPHLGMKFESEVAAYDFYNEYSRKCGFEYANKSRKDGVVTSRKFTCSKEGKRGVDKRDHLTKQSRAETRTGCEAHMVISLDRNINKYNVVGFVAEHNHPLQPPAYVHMIRSHRHISDSQASQIEMADNSGLRPKDFHEFVSKQAGGIEILGYTKKDGKNYLRTKRMQSLRYGEVGALLMYFKRRSENPSFFYDFQMDVEDQITNIFWADAQMINDYEYFGDVVTFDTTYKTNKDYRPLGVFIGLNNHRQTVIFGATLLYDETIPSFQWLFQTFLKAMGGENPKTILTDQYVAMGQAISLVMPNTFHGLCTWHIRQNALRHVNHLYQNGSTFCLELEACIDLHEDESEFLNAWQELIENHKVPADSWLHTIFKVKEKWVWAYVRKTFTAGMRTTQLSESFNAALKNHLKSDLHLVQFFTHFERVVNGKRNNESEAEYESINKLPRLKMLKAPMLVQTSKIYTPRIFEEFQEEYEEYQGTCIKELKQGLYIVTSYDNSHERRVMGNLVDQKVACDCRKFETHGILCSHALKVLDVMNIKIIPLHYILKRWTREARVGMNQDWKTQHIELDIKANFMNRYNDLCPRVLNTTKRSCVSHATYTFWSKV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0909 632 Pfam SWIM zinc finger 539 560 IPR007527 GO:0008270
Lal11g0909 632 SMART 26again6 538 565 IPR006564 GO:0008270
Lal11g0909 632 PANTHER OS03G0181600 PROTEIN 20 629 - -
Lal11g0909 632 ProSiteProfiles Zinc finger SWIM-type profile. 516 563 IPR007527 GO:0008270
Lal11g0909 632 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 629 IPR031052 GO:0006355
Lal11g0909 632 Pfam MULE transposase domain 250 344 IPR018289 -
Lal11g0909 632 Pfam FAR1 DNA-binding domain 44 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0909 Lal-Chr11 12315809 12317719 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0909 MULE 1.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0909 - - cam:101500125 1004.97