Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0888 ATGAATTTGGTTTCTTTGAATGGGGGAGAGAAAATGGGTTTGGAAAATATGCCCAATCAACTTCCTATGCACGGGAAAGAGATAATTTTGGATTCATTAGTGGGAATTGAAAATGTATCAATTAACCCTATTCAATGCACACAAGGCTCAAGTACACAGACTGTCCGAAACCGACTTCCTAACATTTTGCAATTTGGCACACACAAGTCGATGGAAGAAGAACTGAACGTGAATAATGAAACACTAGAGGGATTAGATGACTGTAATGTTAGTGAAGAAGAAAATGTGAATGAAATAGAGGGGTTAAATTTTGAAGAGATTGATTTTCGATTACTAAACGAAGATGAAGTGAAAAAATATAGGTTTTTAAACAATGAAATTGCATACAAATTTTATAAGATGTATGGTTTGAAGAAAGGATTTGGCATTAGAAAATATAATACTCGGCGAGACAAGGATGGTGAGATTTTGTGGCAATCCTTTTTTTGTGATAGAGAAGGATTTAGAGATAAAAAAAATGATCTGATTCGGAAGAGGGCGCCTAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAAGGAGAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAACTCGTTGGTGAATATTATGGTGCGATGATAGCTTCCAACCGAAGAATGACAGAGACAGATGTGGCTCAGATGAACACAATGAGAGAAGTGGGTATTGGGACAGGAAAGATATTTGGGTCTTTTGCTGGTCAATGTGGGGGTTATCAATATATTGGGTTTTCTAAGAAAGACATGTATAATGAAATCCAGAAGCAAAGAAAAATTGGAAATGGAGATGCGGAAACTGCATTACAATACCTAAAGGAGCAATCAAAATCAGATTGTGCAATGTATTGGAGGCATAGTGTAGATGAAGAATGTAAGTTGCAACAATTATTTTGGGCAGATGGATGTAGTATTTTTGACTACTCAATTTTTGGAGATGTTCTTGCTTTTGATGCAACTTATGGTCGAAACAAATATAAGTTTCCAGTTGTTATATTTTCTGGTGTTAATCATCACAAACAAACAACTGTGTTTGCTGCTGCTGTTGTGTCAAATGAGACAGAGGAAGCATACGTATGGCTTTTGGAGAAATTTTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATAACTGATGGTGATTTGTCCATGAAGAATGCAATTAGAAGAGTTTTTCCCGAAGTCCATCATAGGTTGTGTGCTTGGCATATTTGTAACAACGCTGGGAAAAATATAAAGAAAAAGAATTTTCATAAGGATTTCCAAAAAGTGATGTATGCGGATGTAGAGATTGAAGATTTTAATATGATGTGGGAGGAACTTATTAACAAGCATGGACTACATAACAATGCATGGGTGGCTCAGATTTTTGATTGTAGAAGTATGTGGGCGAGGTCTTACATTCGGGGAAAGTTCTATGCTGGTCTGCATACTACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGGTATATAGAATCTGGGTATAACGTTACTGAATTTCTCCATCACTTTCAACGATGTCTAAGTCACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCATATGGTGATGAGTTGTTACAAACTCCTTATCATAATTTAGAGGGTTATGCTGCTTCGATATATACTAGAGCTGTTTTCAAAGAATTTCGTGAAGTGTTGTTGGAAGCTGCAAAGTTGAGGATAATTTCTACCCAGCAAACCTCGAGTCATGTAATATACAAGATTGGAAAGCATTATTGTCCTAATAAGAAATGGCATGTATCACATTTTGACAATGGTACTAACGTGGACATTAAATGTTCTTGTAAAAGAATGGAATCTTTTGGGATGCCATGTAGTCATTCTGTTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTTGATAGATGGACAAAGAAAGCAAAGGATGTTCAACGTCTAAATTTTCAGCAATGTGACCTAAGCAAAGAATCAGTTGAAAGTAGTAGATATGGAGCTTTGAGTGATGGTTGTAAAGTGTTATGTAACTTTGCTTGCAAAACAGAGGAGGATTTTACTGAGATGTTGGAAAAAATATATAACGAATGTAGTAGACTGCGATTGAAACAACAGTCTAGTGAAACGGAAAATGTTGAAAATGATACTGAAGAGCAAGTACGAGATCCAATTCGAGTACGTGCTAAAGGGCGAGCACCTGGGATGACCACAAAAGGTAAGCGGGGTAATCAGTGCGGTATTTGTCGTGAAATTGGCCACAATAGAGCAAGTTGTCCAAATGTTGTTGGTAGTTGTAGTCGTATTTTCGATGACGAACAATAG 2406 0.3649 MNLVSLNGGEKMGLENMPNQLPMHGKEIILDSLVGIENVSINPIQCTQGSSTQTVRNRLPNILQFGTHKSMEEELNVNNETLEGLDDCNVSEEENVNEIEGLNFEEIDFRLLNEDEVKKYRFLNNEIAYKFYKMYGLKKGFGIRKYNTRRDKDGEILWQSFFCDREGFRDKKNDLIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSYFVDEHNHELVGEYYGAMIASNRRMTETDVAQMNTMREVGIGTGKIFGSFAGQCGGYQYIGFSKKDMYNEIQKQRKIGNGDAETALQYLKEQSKSDCAMYWRHSVDEECKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAAVVSNETEEAYVWLLEKFLEAMNGKHPKCVITDGDLSMKNAIRRVFPEVHHRLCAWHICNNAGKNIKKKNFHKDFQKVMYADVEIEDFNMMWEELINKHGLHNNAWVAQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYIESGYNVTEFLHHFQRCLSHMRNNEVMEDFKSSYGDELLQTPYHNLEGYAASIYTRAVFKEFREVLLEAAKLRIISTQQTSSHVIYKIGKHYCPNKKWHVSHFDNGTNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLPSCLVLDRWTKKAKDVQRLNFQQCDLSKESVESSRYGALSDGCKVLCNFACKTEEDFTEMLEKIYNECSRLRLKQQSSETENVENDTEEQVRDPIRVRAKGRAPGMTTKGKRGNQCGICREIGHNRASCPNVVGSCSRIFDDEQ 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0888 801 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 120 758 IPR031052 GO:0006355
Lal11g0888 801 Pfam FAR1 DNA-binding domain 130 218 IPR004330 -
Lal11g0888 801 Pfam MULE transposase domain 338 432 IPR018289 -
Lal11g0888 801 ProSiteProfiles Zinc finger SWIM-type profile. 615 653 IPR007527 GO:0008270
Lal11g0888 801 PANTHER OS02G0262500 PROTEIN 120 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0888 Lal-Chr11 11618141 11621247 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0888 MULE 7.7e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0888 - - lang:109350553 664.455