Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0834 ATGAAGCCTTTGATTTCAACCACCGACGTTGAACTGCTTAAGAGAGCTTGGCGTAATGAGAAGTCAGCCCCTGAGATTCTTCGATTTGAATCTGATTTGATTAACCGTGTCACGGAACAGATTCAATTGATGGAAGAAACCGTGGAGGAGAATTCTACTGATGATGCTGACCCTCTTTCGTTATCTCTATACCAAATGGATTTGGATAGAACTTTGTTTCTATTAAGATCATATCTTCGGGTCCGCATCCAGAAGATTGAAAAGTACATGTTCCACATCCGGAAAACCGAAGAACTCTGGAACAGGCTATCTAAAGAAGAAAAAAAATTCACTAGAGGGAAAGACTACCTTTTACAGTGCACGGATGACCAAAAGAAACATGTGGAGGAGAATCAATCTGTTATAAGTGAAGAGGATGACATGGAAGTAAAGAGTATCTCACTGGCATTCAGCTTGAAGATGGGCCTGTCGAAGCTCTTTGAAATGGAGCCTGGTGTCCTCTACTTCATATGTTACAAATCAATAAAGGCACTCGTAGAGAGTGGCAAAATCGATCTGCTGTGA 564 0.4131 MKPLISTTDVELLKRAWRNEKSAPEILRFESDLINRVTEQIQLMEETVEENSTDDADPLSLSLYQMDLDRTLFLLRSYLRVRIQKIEKYMFHIRKTEELWNRLSKEEKKFTRGKDYLLQCTDDQKKHVEENQSVISEEDDMEVKSISLAFSLKMGLSKLFEMEPGVLYFICYKSIKALVESGKIDLL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0834 187 Pfam GINS complex protein 34 108 IPR021151 -
Lal11g0834 187 PIRSF GINS_Sld5 1 145 IPR008591 GO:0006261
Lal11g0834 187 PIRSF GINS_Sld5 120 187 IPR008591 GO:0006261
Lal11g0834 187 SUPERFAMILY GINS helical bundle-like 6 112 IPR036224 -
Lal11g0834 187 PANTHER SLD5 PROTEIN 6 112 IPR008591 GO:0006261
Lal11g0834 187 CDD GINS_A_Sld5 9 110 IPR038749 -
Lal11g0834 187 Pfam DNA replication complex GINS protein SLD5 C-terminus 160 187 IPR031633 -
Lal11g0834 187 SUPERFAMILY PriA/YqbF domain 156 187 - -
Lal11g0834 187 Gene3D - 2 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0834 Lal-Chr11 10298712 10302246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0834 4 141 Core DNA Replication Machinery Family AT5G49010 55.263 1.78e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0834 K10735 - gmx:100784291 226.098