Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0789 ATGGTTTCTACACGAAGCATGGCAAGAGAAAACGATAGTTGGGTACAAGAACGTGAAAAGATGAGGCAAGAAAGAGAGGAGCTTCATCTACGATTAGAACTAAATGAGATACGTACTAAGCATACAGAAGAGATGCTAGCTACAATAGCCACCAAATTAGGGATTTCCAAAGGGGCTACTTCCGAATACAATGAAGCAGTTAAGCTCTCTGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTTCCTGCATTTGGACCAGAAACCCAGCGCCATGCATCCGCAATAAGAAGGAAGATTACGATATTTGGGACCAGACTTGATAGCTTGCAATCCCTTTTATCAAAGAACCCTGGAAAGGATAGTTTGCTTGGGCCAGATATAAAATCAAATGCAATGAGCAGAACCGTTGGCCTCGACAACAGTGGACTTAGTGCTATTCAAGCAGAGCAAGATGAGGGCCTTGAGAAATTGGAGGAGACTGTAATAAGTACGAAACATATTGCACTGGCAGTGAATGAAGAGCTGGGTTTACACACAAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGGCTGAGGGTAACACTCTTACTAATTAACTTCTATATTGGTACCATATCATTTAAGCAATTAAGCATATCAAAATTAAACTTTCTGATATTACAATGTGCTTAA 693 0.4026 MVSTRSMARENDSWVQEREKMRQEREELHLRLELNEIRTKHTEEMLATIATKLGISKGATSEYNEAVKLSDDINGMISERSSFPAFGPETQRHASAIRRKITIFGTRLDSLQSLLSKNPGKDSLLGPDIKSNAMSRTVGLDNSGLSAIQAEQDEGLEKLEETVISTKHIALAVNEELGLHTRLIDDLDEHVDVTDSRLRVTLLLINFYIGTISFKQLSISKLNFLILQCA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0789 230 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 146 199 IPR000727 -
Lal11g0789 230 Gene3D - 150 203 - -
Lal11g0789 230 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 59 121 - -
Lal11g0789 230 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 117 200 - -
Lal11g0789 230 SUPERFAMILY SNARE fusion complex 146 201 - -
Lal11g0789 230 PANTHER SYNTAXIN 59 121 IPR045242 -
Lal11g0789 230 PANTHER SYNTAXIN 117 200 IPR045242 -
Lal11g0789 230 CDD SNARE_Qc 149 201 - -
Lal11g0789 230 Coils Coil 11 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0789 Lal-Chr11 9028564 9033076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0789 63 199 SNARE and Associated Proteins AT1G16240 57.303 1.96e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0789 K08503 - gmx:100799465 218.394