Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0714 ATGTTATATCTTATAACATACAGATCCAGCAATTCGTGTAACGCAAGGGACAGCAAAAACGACGCCGTGCTTTCACAGTCCCGCGTGGTAGACGACGACGCGGTCAAACAAACGGTGCCGTTTCATTCACCGCCGTACGTTATTCTCACAAATCACGATCTTCCTGAAACGACGTCGTTATCAATCATCCGCAACCTTCTTCAGAAACCTACTTTCCCCAAAATCAATAGGCCAATGGCATCTTCTTCAGACTCATGGATGAAGGAATACAATGAAGCAGTTAAGCTCTCTGATGATATCAATGGCATGATTTCTGAGAGGAGTTCATTTCCTGCATCTGGACCAGAAACCCAGCGCCATGCATCCGCTATAAGAAGGAAGATTACGATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTATCAAAGAACCCTGGAAAATCTGAGAAGGAGATGAATCGTCGCAAGGACACGCTTCTAAATTTAAGATCAAAAGTCAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATATAAAATCAGATGCAATGAGCAGAACCGTTGGCCTGGACAACAGTGGACTTGTTGGACTTCAACGGCAAATTATGAAAGAGCAAGATGAGGGCCTTGAAAAATTGGAGGAGACTGTAATAAGTACTAAACATATTGCATTGGCAGTGAATGAAGAGCTGGGTTTACACACAAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCCGTTTTGAACAAACGTACTAAAGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGGTTGGTATAGTTGTTTTGGTTCTTGTCATATGGCTGTTGGTCAAATATTTGTAA 924 0.4275 MLYLITYRSSNSCNARDSKNDAVLSQSRVVDDDAVKQTVPFHSPPYVILTNHDLPETTSLSIIRNLLQKPTFPKINRPMASSSDSWMKEYNEAVKLSDDINGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKNPGKSEKEMNRRKDTLLNLRSKVNQMASTLNMSNFANRDSLLGPDIKSDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVISTKHIALAVNEELGLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVVLVLVIWLLVKYL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0714 307 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 79 301 - -
Lal11g0714 307 Gene3D - 213 275 - -
Lal11g0714 307 SUPERFAMILY SNARE fusion complex 202 272 - -
Lal11g0714 307 PANTHER SYNTAXIN 79 301 IPR045242 -
Lal11g0714 307 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 211 273 IPR000727 -
Lal11g0714 307 CDD SNARE_Qc 214 271 - -
Lal11g0714 307 SMART tSNARE_6 206 273 IPR000727 -
Lal11g0714 307 Pfam SNARE domain 248 299 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0714 Lal-Chr11 6994682 6998600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0714 79 307 SNARE and Associated Proteins AT1G16240 74.569 1.03e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0714 K08503 - gmx:100794038 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0714 11 6994682 6998600 Lal11g0714 11 6994682 6998600 ECH
Lal3g0835 3 7606357 7612431 Lal11g0714 11 6994682 6998600 LSH
Lal11g0714 11 6994682 6998600 Lal18g1593 18 17452477 17454375 PCT
Lal18g1593 18 17452477 17454375 Lal11g0714 11 6994682 6998600 PCT