Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0705 ATGGTACTCCTATTCATCACCAAGGGGAAAAGTTCTCGCATTCTTACCTTTGATGAAGAAGTATTCTTCATATATCTTCTTCCTCCAATAATATTCAATGCTGGATTTCAGGTGAAGAAGAAACAGTTCTTCCACAACTTTTTAACCATCATGCTGTTCGGGGTGATCGGTGTTTTCGTTTCAACGGCTGTTATTACTTGTGGAAGCCGGTTTCTGTTTCCGAAGTTGAACTTCCTTGGCCTGAGTGGGCAAGAATATCTTGCAATTGGAACAATTTTCTCATCAACAGACACAGTTTGTACACTGCAGGTTCTGCATCAAGACGAAACTCCTTTACTATACAGCCTAGTCTTTGGGGAAGGAGTTGTAAATGACGCAACATCGGTTGTTCTCTTCAACGCTGTGCAAAAGATCGATCTTTCGAGACTTGATGGCAGGGCGTTCCATGTTCTTGGAGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTTGGAGTTGTAGCTGGACTTCTAACAGCATATCTCTTGAAAGCCTTAAGCTTTGGCAGACATTCAAGTATTCGTGAAATTGCATTGATGATGTTAATGGCATACCTATCCTACATGTTGTCAGAGCTATTTGATCTAAGTGGAATTCTCACTGTATTCTTTTGTGGAGTACTAATGTCACATTACGCATGGCATAACGTTACTGAAATTTCAAGAGTCACAACTAGGCACCTGTTTGCAGCAATATCATTTATTGCAGAAACCTTCATATTCCTTTATGTGGGCATGGATGCCCTTGACATTGAAAAGTGGAGGATGACCAAATTAAGGGCTGCATTTGTTTTCCCTCTCTCTTCTCTATCCAATTATATGAATAGGCGTGCTCACCCATCATCAAAAATCACATTCAAACATCAGATAGTTATTTGGTGGGCTGGACTAATGAGGGGAGCAGTCTCCATTGCTCTGGCTTTCAAACAGTTTACATTTTCTGGGGTTACTTCTGATCCAGTCAATGCAACAATGGTTACCAACACCATTATTGTAGTCCTTTTCAGCACGCTGGTGTTTGGTTTTCTAACAAAACCACTTATTAGATATCTACTTCCTCACAATGCAACAAGGAAAAACAATGGCCATGAAGAATCAGGTCCACACCCAGAGGACATGAATCTACCTTTTCTATCCCTTGAGGAGTCAACAGAAACCAACCTTAGCCGTGCAAAGGAAAGTTTGTCCATGTTTATAGAAAGTCCTGTGTATACAATGCATTACTATTGGAGAAGTTTTGATGATTCCTACATGAGACCTATTTTTGGGGGACCTCGTGCTCACTTTCACAATGCTAATACAGATCAAAATCATGGACATTTGAGTACTGAGGTTTGA 1377 0.4045 MVLLFITKGKSSRILTFDEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFVSTAVITCGSRFLFPKLNFLGLSGQEYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDLSRLDGRAFHVLGDFLYLFSTSTALGVVAGLLTAYLLKALSFGRHSSIREIALMMLMAYLSYMLSELFDLSGILTVFFCGVLMSHYAWHNVTEISRVTTRHLFAAISFIAETFIFLYVGMDALDIEKWRMTKLRAAFVFPLSSLSNYMNRRAHPSSKITFKHQIVIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMVTNTIIVVLFSTLVFGFLTKPLIRYLLPHNATRKNNGHEESGPHPEDMNLPFLSLEESTETNLSRAKESLSMFIESPVYTMHYYWRSFDDSYMRPIFGGPRAHFHNANTDQNHGHLSTEV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0705 458 Pfam Sodium/hydrogen exchanger family 12 361 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal11g0705 458 PANTHER SODIUM/HYDROGEN EXCHANGER 2 441 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal11g0705 458 Gene3D - 82 134 - -
Lal11g0705 458 PANTHER SODIUM/HYDROGEN EXCHANGER 2 441 - -
Lal11g0705 458 PRINTS Na+/H+ exchanger signature 21 32 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal11g0705 458 PRINTS Na+/H+ exchanger signature 35 49 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal11g0705 458 PRINTS Na+/H+ exchanger signature 50 58 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal11g0705 458 PRINTS Na+/H+ exchanger signature 90 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0705 Lal-Chr11 6801616 6809532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0705 2 439 Antiporters AT5G55470 70.282 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0705 - - gmx:100813332 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0705 11 6801616 6809532 Lal11g0705 11 6801616 6809532 ECH