Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0695 ATGCAAACATCCCAGAAGCATGGAACTTCCTATGGCTCTGGCAGGTTCTATGTTGAGCCTGTGCAAAATCTGGAGTCATATTGCTTACCGTCAAGTGAGAACGTAGATAATTACTCTTCGTCTGATAACAGCAGCCGGGCAACCTACCCTTCAGTCCAGACTTTTGGACACTCCTGCACCCTTGAATCTTCTTCAACAAGCAACAGCTTCCCTTGCCAAAATTCTCCATTCACTGTCAGTTTCTCACCTAACGGTAGCCCAGTGTCAAAATCGTATGTGTCAAGGCCACAACATTCTCTTGAAATTATTAGTGGCTCACCTGAAAATGATTCTTGTTTGACACATGATCTCGATGATCTGAGGCATAAGATAAGAGAGCTTGAAACTGCTTTGCTGGGACCTGATGCAGATACGCTAGACATGTATGATGCTATAATTCCTGAAGAATCTGATACATTTGTCTTGGAGACAGAGAAGTGGACGCAAATCACGGAGATGATATCTCTCTTGGAGACAGAGAAGTGGACGCAAATCACGGAGATGATATCTAGAGGGGATTTGAAAGAGATGCTATATACTTGTGCAAATGCAATGCAATGTAATGATATGGAGACAACTGGATGGCTGATGTCAGAGATACGTAAAATGGTGAGCATTTCGGGCAAGCCAATCCAACGACTGGGAGCATACATGTTGGAGGCTCTTGTTGCTAAGATGGCCTCTTCAGGAAGCACAATCTACAAAGCCTTAAAATGTAAGGAGCCTACTGGTAATGAACTTCTTTCATACATGCATGTACTTTATGAAATATGCCCATACTTCAAGTTTGGGTATATGTCTGCAAATGGAGCAATTGCCGAAGCTATGAAGCATGAAATTAGAGTCCACATAATTGACTTTCAGATTAGCCAGGGAAGCCAGTGGGTGAGCCTAATCCAGGCTCTTGCTAACCGGCCTGGAGGACCCCCAAAGATCCGAATAACAGGTGTTGATGATTCCATTTCGGCTTATGCAAGGGGAGGGGGGCTTGATATAGTTGGGAAAAGGTTATCAACACTTGCACAGTCATGTAACGTGCCCTTTGAGTTTGATGCTGTCAGGGTTTCTGCTTCTGAAGTGCAACTGAAAGATCTTGAGCTTCGACCCGATGAAGCAGTGGCTGTAAATTTTGCCATCATGCTGCACCATATGCCAGATGAAACTGTGAACAGTCAGAATCATCGTGACCGGTTGTTGAGATTGGCAAAGAACCTGTCTCCCAAGGTGGTGACTCTGGTCGAGCAAGAGTTTAATACCAATCATGTTCCATTCTTGCCGCGTTTCATCGAGACACTGAACTACTACCTGGCTATTTTCGAATCACTTGATGTCGTTCTACCGAGGGAGCACAAAGAGAGGATTAATGTAGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAGTCGCATGTGAAGGGGTTGAACGAGTGGAGCGTCATGAGCTTCTGAACAAGTGGAGGATGCGTTTCGCAATGGCCGGGTTTACACCTTATCCATTAAGCTCTTTTGTTAATTCTTCAATCAAGAATCTTCTGGAGAGCTACAAGGGACACTACACTCTAGAAGAGAGAGATGGTGCACTTTATCTTGGTTGGATGAATCAAGTTCTAATTGCCTCTTGTGCTTGGAGGTACCCAAGGATTCGCGGGTAG 1692 0.4456 MQTSQKHGTSYGSGRFYVEPVQNLESYCLPSSENVDNYSSSDNSSRATYPSVQTFGHSCTLESSSTSNSFPCQNSPFTVSFSPNGSPVSKSYVSRPQHSLEIISGSPENDSCLTHDLDDLRHKIRELETALLGPDADTLDMYDAIIPEESDTFVLETEKWTQITEMISLLETEKWTQITEMISRGDLKEMLYTCANAMQCNDMETTGWLMSEIRKMVSISGKPIQRLGAYMLEALVAKMASSGSTIYKALKCKEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKHEIRVHIIDFQISQGSQWVSLIQALANRPGGPPKIRITGVDDSISAYARGGGLDIVGKRLSTLAQSCNVPFEFDAVRVSASEVQLKDLELRPDEAVAVNFAIMLHHMPDETVNSQNHRDRLLRLAKNLSPKVVTLVEQEFNTNHVPFLPRFIETLNYYLAIFESLDVVLPREHKERINVEQHCLAREVVNLVACEGVERVERHELLNKWRMRFAMAGFTPYPLSSFVNSSIKNLLESYKGHYTLEERDGALYLGWMNQVLIASCAWRYPRIRG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0695 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 168 - -
Lal11g0695 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 169 556 - -
Lal11g0695 563 Pfam GRAS domain family 187 557 IPR005202 -
Lal11g0695 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 556 IPR005202 -
Lal11g0695 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 168 IPR005202 -
Lal11g0695 563 ProSiteProfiles GRAS family profile. 178 557 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0695 Lal-Chr11 6575077 6581541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0695 1 557 GRAS Transcription Factor Family AT1G50600 55.830 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal11g0695 GRAS 2.7e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0695 - - gmx:100785400 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0695 11 6575077 6581541 Lal11g0695 11 6575077 6581541 ECH
Lal11g0695 11 6575077 6581541 Lal18g1606 18 17525834 17527450 PCT
Lal18g1606 18 17525834 17527450 Lal11g0695 11 6575077 6581541 PCT