Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0690 ATGGCCACCACCGCAACTGCCACCTCCCCCCCATCAGACTTCTTTGGCACCCATATTAGTAACACAACCTCAAATTCCGGAAAATTCCAAGCCTTCTTCAACTTGGGCACCAAAAAGGCACCACCCGCACCAAAGAAAAAAGAGGCGATTGTAATTAACGTATATGAGTTAGTTAACCACAATATTATAGTCACATCAATTGGTAAAACCAAGTTTAGACTGACTCATGTGGTTACCAGGTGCCCAACTACCGATTGGCTGGACGGGTCACTAGTTGGGGACCGTGGGTTCGATCCATTGGGGTTTGCGAAACATGTAGAGTATTTGCAGTTCGATTTGGACTCTTTAGACCAGAACCTTGTGAAGAATTTCGATGGGGATGTCATCGGAACCATGCCTTACACGAAGGTTTTTCCGTTGCAGAGGTTCCGTGAGTGTGAGCTCATTCATGGAAGGTGGGCCATGCTCGGTGCACTTAGTGCCCTTGTTGTTGAGGCCTTCACGAGTGTTGCATGGCAAGATGCTAGAAAGGTAAAACTTATAAGATGGGATGAGCATGACATCTAG 567 0.4674 MATTATATSPPSDFFGTHISNTTSNSGKFQAFFNLGTKKAPPAPKKKEAIVINVYELVNHNIIVTSIGKTKFRLTHVVTRCPTTDWLDGSLVGDRGFDPLGFAKHVEYLQFDLDSLDQNLVKNFDGDVIGTMPYTKVFPLQRFRECELIHGRWAMLGALSALVVEAFTSVAWQDARKVKLIRWDEHDI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0690 188 Gene3D Chlorophyll a/b binding protein domain 72 185 - -
Lal11g0690 188 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 181 - -
Lal11g0690 188 Pfam Chlorophyll A-B binding protein 85 175 IPR022796 -
Lal11g0690 188 SUPERFAMILY Chlorophyll a-b binding protein 85 176 - -
Lal11g0690 188 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 181 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0690 Lal-Chr11 6429647 6430441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0690 19 181 Chloroplast and Mitochondria Gene Families AT3G08940 49.143 6.37e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0690 K08915 - gmx:100820335 180.259