Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0685 ATGCCGACTTCCGTGAAGGACTTCCCATACTATGTTCAGAAGTCGGTCTTGCATTTGATGGAAGAAGAAATGAACACGAATAATGAAACTCACTTTGAAGCAGAGGGTTTAGATGAATTTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGGGTTAGATTTTGAAGAGATTAATTTTCGATTATTAAATGAAGATGAAGTGAAGAAATATAGGGAAGGATTTAGAGATAAGAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAATAAAAAAGGAGATTGGTATGTTAATTATTTTGTTGATGAACATAATCATGAATTGGTGGGTGAACATTACGGTGCAATGATAGCCTCTAACCGAAGAATGACAGAGACAGACGTGGCTCAGATGAACACAATGAGAGAAGTGGGCATTGGGACAGGAAATATATTTGGTTCGTTTGCCGGTCAATGTGGTGGATATCGACATACTGTAGATGAAGAAGGCAAGTTACAACAATTATTTTGGGCTGATGGATGCAGCATTTTCGACTACTCAATTGGAGATGTTCTTACTTTTGATGCAACTTATGGTCGAAACAAATACAAGTTCCCAGTTGTAATTTTTTCTAGTGTGAATCATCACAAGCAAACGATTGTGTTTGGCGCCGCTGTTGTGTCAAATGAGACAGAGGAAACATACATTTGGCTTTTGGAGAAATTTTTGGAGGCAATGATTGGGAAACAACCCAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAGAATGCAATCAAAAGATTTTTTCCCGAAGCACACCATAGACTATGTGTTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAAAATAACTTTCATAAGGATTTCCAAAAAGTTATGTATGTTGATGTTGATATTGATGATTTTAATATGATGTGGGAAGAACTTATTGCTAAGCATGGACTTCATAACAATGCATGGGCCGCTCAGATTTTTGATTGCAGAAAACTTATTGCTAAGCATGGACTTCATAACAATGCATGGGCCGCTCAGATTTTTGATTGCAGAAGTATGTGGGCGAGGTCTTACATTCGGGGAAAGTTCTATGCTGGTTTGCATACTACATCACGTTTATCGTGGACATTAAATGCTCGTGTAAAAGAATGGAATCTTTTGGGATGTCATGTAGTCAGTGTTTTTGTCTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTTGAAAGATGGACAAAGAAAGCGAAAGATGTTCAAGGTGTCAATTTCCAACAATGCGAATTAAGTAAAGAATCAGTTAATATTAGTAGATATGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAATCTTGCTTGCAAAACGGAGGAAGACTTTACCGAGATGCTGGAAAAAGTTTATAACGAATGTAGTAGACTCCGATCAAAACAACACTCTAGTACGATGGAAAATGTTGACAATGCCACTGGAGATCAAGTAAGAGACCAGTTCGAGTGCGTGCTAAAGGTAGAGTACCGGGGATTACCTCAAGGCCCAAGCGAG 1605 0.3801 MPTSVKDFPYYVQKSVLHLMEEEMNTNNETHFEAEGLDEFNGSEDENVNEVEGLDFEEINFRLLNEDEVKKYREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDNKKGDWYVNYFVDEHNHELVGEHYGAMIASNRRMTETDVAQMNTMREVGIGTGNIFGSFAGQCGGYRHTVDEEGKLQQLFWADGCSIFDYSIGDVLTFDATYGRNKYKFPVVIFSSVNHHKQTIVFGAAVVSNETEETYIWLLEKFLEAMIGKQPKCVITDGDLSMKNAIKRFFPEAHHRLCVWHICNNAGKNIKKNNFHKDFQKVMYVDVDIDDFNMMWEELIAKHGLHNNAWAAQIFDCRKLIAKHGLHNNAWAAQIFDCRSMWARSYIRGKFYAGLHTTSRLSWTLNARVKEWNLLGCHVVSVFVLLILDISQLPSCLVLERWTKKAKDVQGVNFQQCELSKESVNISRYGALSDACRVLCNLACKTEEDFTEMLEKVYNECSRLRSKQHSSTMENVDNATGDQVRDQFECVLKVEYRGLPQGPSE 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0685 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 172 352 IPR031052 GO:0006355
Lal11g0685 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 160 IPR031052 GO:0006355
Lal11g0685 535 Pfam FAR1 DNA-binding domain 72 126 IPR004330 -
Lal11g0685 535 Pfam MULE transposase domain 201 295 IPR018289 -
Lal11g0685 535 PANTHER OS02G0262500 PROTEIN 70 160 - -
Lal11g0685 535 PANTHER OS02G0262500 PROTEIN 172 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0685 Lal-Chr11 6324106 6327019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0685 MULE 6.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0685 - - lang:109327968 400.208