Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0666 ATGGCTAGTGGAAAGGGAATCTCACTGGAAGAAATCAAGAACGAGAATGTTGATCTGGAACGTATTCCGGTTGAGGAAGTATTTGAGCAACTAAAATGTACCAAAGAAGGTTTATCCACACAGGAAGGAGCCAGCAGGCTAGAAATATTTGGACCAAACAAACTAGAAGAGAAGAAGGAGAGCAAATTCCTCAAGTTTCTTGGGTTTATGTGGAATCCTTTATCATGGGTCATGGAATCTGCAGCTATAATGGCCATTGCTCTTGCCAATGGTGATGGGAAGCCTCCAGATTGGCAAGATTTTGTGGGTATTATTTGCTTGTTGGTTATCAACTCTACTATCAGTTTCGTTGAAGAAAATAATGCTGGAAATGCTGCTGCTGCACTTATGGCCGGTCTTGCTCCTAAAACAAAGATCATGATCCTCTGTGGTCTGAAGGATGATGCTAAGAAGAAGGTCCACGCGATTATTGACAAGTTCGCAGAGAGAGGGCTTCGTTCACTTGCTGTAGCTAGACAGGAAGTTCGTGAGAAAACAAAAGAAAGTGCTGGTGGTCCATGGGAGTTTGTTGGTTTGTTGTCACTGTTTGATCCCCCAAGGCATGATAGTGCTGAAACCATTCGTAAAGCTCTTAATCTTGGCGTCAATGTTAAGATGATTACAGGTGATCAACTTGCCATAGCTAAGGAAACCGGAAGGAGACTCGGTATGGGTACGAATATGTATCCATCTTCTTCCTTGCTTGGTCAACACAAAGATGAAAGTATTGGCTCAGTGGAAGAGCTGATTGAGAAGGCAGATGGATTTGCCGGAGTTTTTCCAGAACACAAGTATGAAATTGTAAAGAAGTTGCAAGAGAGGAAACATATTTGTGGAATGACTGGAGATGGTGTCAACGATGCTCCTGCTTTGAAGAAGGCTGATATCGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAGGTGCTTCTGACATTGTCTTGACAGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGTAGAGCTATTTTCCAAAGAATGAAGAACTACACGATCTATGCAGTATCTATCACTATCCGTATCGTGTTTGGTTTTATGTTTATTGCGTTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGATCATTGCCATTTTGAACGACGGAACAATAATGACAATTTCAAAGGACAGAGTTAAGCCATCTCCCTTACCCGATAGCTGGAAACTGAAAGAAATATTCGCTACTGGGATTGTGCTCGGAGGTTACATGGCACTAATGACAGTTATATTTTTCTGGGCAATGAAAGATACAACTTTCTTTCCTCGCAAATTTGGTGTTAGACCCATACATGACAGCCCCTATGAAATGACTGCTGCTTTGTATCTGCAAGTCAGTACAGTTAGTCAGGCTCTTATATTTGTAACCCGATCGCGCAGTTGGTCTTTTGTTGAACGCCCTGGAATGTTGTTAATGGGAGCTTTTGTAATTGCTCAGCTGATTGCTACAATAATAGCAGTATATGCTAACTGGGGCTTTGCAAAGATTCAAGGAGTTGGTTGGGGTTGGGCAGGAGTTATATGGCTCTATAGTGTTGTCTTCTATTTTCCACTTGACTTGTTAAAGTTCGCCATCCGCTATGTCTTGAGCGGCAAAGCTTGGGTAAATATAGAAAACAAGACTGCTTTCACCACTAAGAAAGACTACGGTAAAGAGGAGAGGGAGGCTCAATGGGCTCATGCTCAGAGGACCCTACACGGTCTTCAACCACCAGAAACTTCTAATATTTTCAATGAAAGCAACAATTACAGAGAACTGAGTGAGATTGCTGAGCAAGCTAAAAGACGTGCCGAAGTTGCAAGGCTTCGCGAGCTTCACACTCTTAAGGGACATGTTGAGTCTGTGGTAAAGCTAAAAGGTCTGGACATTGATACAATCCAACAACACTACACTGTGTGA 1971 0.4236 MASGKGISLEEIKNENVDLERIPVEEVFEQLKCTKEGLSTQEGASRLEIFGPNKLEEKKESKFLKFLGFMWNPLSWVMESAAIMAIALANGDGKPPDWQDFVGIICLLVINSTISFVEENNAGNAAAALMAGLAPKTKIMILCGLKDDAKKKVHAIIDKFAERGLRSLAVARQEVREKTKESAGGPWEFVGLLSLFDPPRHDSAETIRKALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIGSVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYMALMTVIFFWAMKDTTFFPRKFGVRPIHDSPYEMTAALYLQVSTVSQALIFVTRSRSWSFVERPGMLLMGAFVIAQLIATIIAVYANWGFAKIQGVGWGWAGVIWLYSVVFYFPLDLLKFAIRYVLSGKAWVNIENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPETSNIFNESNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0666 656 PANTHER CALCIUM-TRANSPORTING ATPASE 4 140 - -
Lal11g0666 656 PANTHER CALCIUM-TRANSPORTING ATPASE 138 636 - -
Lal11g0666 656 SUPERFAMILY HAD-like 150 341 IPR036412 -
Lal11g0666 656 Gene3D - 69 143 - -
Lal11g0666 656 Gene3D - 294 552 - -
Lal11g0666 656 PANTHER PLASMA MEMBRANE ATPASE 4 140 - -
Lal11g0666 656 PANTHER PLASMA MEMBRANE ATPASE 138 636 - -
Lal11g0666 656 Gene3D - 605 656 - -
Lal11g0666 656 Pfam haloacid dehalogenase-like hydrolase 188 308 - -
Lal11g0666 656 Gene3D - 199 240 IPR023214 -
Lal11g0666 656 Coils Coil 607 627 - -
Lal11g0666 656 Gene3D - 145 198 IPR023299 GO:0000166
Lal11g0666 656 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 553 IPR023298 -
Lal11g0666 656 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Lal11g0666 656 PRINTS P-type cation-transporting ATPase superfamily signature 191 202 - -
Lal11g0666 656 PRINTS P-type cation-transporting ATPase superfamily signature 213 223 - -
Lal11g0666 656 PRINTS P-type cation-transporting ATPase superfamily signature 294 313 - -
Lal11g0666 656 PRINTS P-type cation-transporting ATPase superfamily signature 317 329 - -
Lal11g0666 656 PRINTS H+-transporting ATPase (proton pump) signature 153 171 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 PRINTS H+-transporting ATPase (proton pump) signature 266 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 PRINTS H+-transporting ATPase (proton pump) signature 294 310 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 PRINTS H+-transporting ATPase (proton pump) signature 325 350 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 PRINTS H+-transporting ATPase (proton pump) signature 466 487 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 268 383 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal11g0666 656 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0666 Lal-Chr11 5974506 5985436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0666 134 656 Primary Pumps ATPases AT2G24520 82.890 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0666 K01535 - gmx:100804422 938.332