Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0645 ATGGATGTTATAAAAACGCAGCAAATCTCATCTCGAGCGATCGAGAAAGTTGTAGTTCACCCACTTGTGTTGCTTAGCATAGTCGACAACTACAACAGGGTCGCTAAGGACACTCGAAAACGTGTCGTTGGTGTCTTACTCGGTTCCACTTTCAAGGGCACCGTCGATGTTACCAATAGCTATGCCGTACCCTTTGAAGAAGATGACAAGGATCCTAGCATCTGGTTTCTCGACCACAATTATCATGAATCAATGTTTTCCATGTTTAAGAGAATAAATGCAAAGGAGCATGTTGTTGGGTGGTATAGCACCGGTCCAAAACTGCGTGAAAATGATCTCGACATTCATGGATTATTTAATGACTATGTTCCAAATCCTGTTTTAGTTATAATTGATGTTGAACCTAAGGAGCTGGGAATTCCAACGAAAGCTTATTATGCAGTTGAAGAGGTTAAAGAGAATGCTACTCAGAAAAGCCAAAAGGTCTTTGTGCATGTGCAATCAGAGATTGCTGCTCATGAAGTTGAGGAAATAGGAGTTGAACACTTGCTTAGAGATGTGAAGGATACAACCATTAGCACCCTTGCAACAGAGGTGAGTGGAAAACTCACAGCCTTGAAGGGTTTGGATGCAAGACTTAAGGAGATACGGGGTTACCTTGATCTTGTTATTGATGGGAAGCTTCCTTTAAACCATGAGATATTGTACCATCTTCAGGATGTGTTCAACCTGCTACCAAATCTTAATGTCGCTGATCTGATCAAGGCTTTTGCAGTGAAAACAAATGATATGATGCTGGTAATATACCTGTCATCTCTCATTAGAAGTGTAATTGCACTCCACAACTTGATTAACAACAAGATGCTCAACAAAGAACATGAAAGGGCAGAAGATTCAAAATCAGTGGCTGTACCTAGTGCAGGTGCAAGTTAA 933 0.4094 MDVIKTQQISSRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSTFKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKSVAVPSAGAS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0645 310 ProSiteProfiles MPN domain profile. 17 154 IPR037518 -
Lal11g0645 310 CDD MPN_RPN7_8 15 295 IPR033858 GO:0005838
Lal11g0645 310 PANTHER 26S PROTEASOME REGULATORY PARTICLE NON-ATPASE SUBUNIT 8 1 309 - -
Lal11g0645 310 Gene3D Cytidine Deaminase, domain 2 9 194 - -
Lal11g0645 310 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
Lal11g0645 310 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 124 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lal11g0645 310 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 309 - -
Lal11g0645 310 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0645 Lal-Chr11 5482577 5486817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0645 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 29.487 1.87e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0645 K03038 - gmx:100790393 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0583 3 4408788 4413682 Lal11g0645 11 5482577 5486817 ECH
Lal11g0645 11 5482577 5486817 Lal11g0645 11 5482577 5486817 ECH