Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0632 ATGGCTCTTCCTCCTTCAGATGTTAATCATCTTTCTCATCCTTGTATATACGGGGACATTGGTTCATCATACCCAAAGAGAAAGTCTGATTTTATGAAATGGTTTGATAAGATATTTAATACAGGGTCGAGTAGAGGAAGGAAGGGTGGTTGTCAAATACCTGTGGAGGAAAACATGGTTTTGAGAGCTCCAGCTAGATCATTGGATGATCGTGCTAGATCTAAGGAGGAAGAAGATCTGAACCGTTCAATAGCACTTTCCTTAGGTGAAGATTTAAGGAGACCAAATGGATATAGATGGAGAACAGGGGCAGATGAAGATTATGCAAGAGCCCTTCAGGATTGTTTGCACTCATCTGCACATCCTCCATATGACCCTTCACATATTTATCCCCCTAGATATGGTTTAAGGTCGCAATTCAGAGTATGTGCAGGGTGCAAGCAGGAAATACTCTTTGGCAATTGTTTGGGATGTATGAATACTTATTTTCATCCGAACTGTTTTCGCTGTCACTCTTGTGGTCACCCCATTATTGAGCGCGAGTTTTCTCTGTCAGGGAAGAATCCATATCACAAGTCATGTTTTCAAGAACTAACCCATCCAAAATGTGAAGTTTGCCACCATTTTATTCCTATAAATCCTTCTGGTTTGATAGAGTATAGGTGCCACCCTTATTGGTTCCAAAAGTATTGTCCATGTCATGAATATGATACTACAGCACGCTGCTGCAGTTGCGAAAGATTAGAGTCTCGGAACGAAAAATACTTTAGATTGGAAGATGGGCGGATTTTGTGCCTTGAGTGCATGGAATCTGCAATAACAGATACTGGTGAATGCCAACCTCTTTACCATGCTATAAGAGATTATTATGAAGGAATGAATATGAGAATAGATCAACAAGTTCCCATGCTTCTAGTTGGGAGAGAAGCACTTAATGAAGCTATTGTTGGGGAGAAGAATGGTTTCCATCACTTGCCAGAAACAAGAGGCTTATGCCTTTCAGAAGAACAAACTGTCACAAGTGTACATAGATGGCCAAGAGTTGGAGGCAATAGACTAACAGGGATGAGAACTCAACCTCAAAGGCTGACTAGAAAATGTGAAGTTACAGCAATCCTTGTTCTCTATGGTCTTCCAAGGTTACTCACAGGTGCTATCCTTGCCCATGAGTTGATGCACGCTTGGTTACGCCTTAAAGGATACCGCAATCTTAACCTTGATGTAGAGGAAGGTATTTGTCAAGTTCTTTCTTATATGTGGCTTGAGGCTGAAGTAATGCCAAGGCAGCCAAACTATAGAAGCATGCCATCAACATCAGCAGCTTCGTCTTCTTCTTCCTCGTCATCATCAAAGAAAGGTGAAAGGTCACAAGTTGAGAATAAATTGGGTGCATTTTTCATTCACCAAATTGCCAATGATTCTTCTGCAGCTTATGGTGGTGGCTTCAGGGCTGCTAATGAAGCTGTTAATAAATATGGTTTAAGGTGTACTCTGGAGCATATTCGTTTGACTGGCCAATTCCCTTTGTAA 1530 0.4124 MALPPSDVNHLSHPCIYGDIGSSYPKRKSDFMKWFDKIFNTGSSRGRKGGCQIPVEENMVLRAPARSLDDRARSKEEEDLNRSIALSLGEDLRRPNGYRWRTGADEDYARALQDCLHSSAHPPYDPSHIYPPRYGLRSQFRVCAGCKQEILFGNCLGCMNTYFHPNCFRCHSCGHPIIEREFSLSGKNPYHKSCFQELTHPKCEVCHHFIPINPSGLIEYRCHPYWFQKYCPCHEYDTTARCCSCERLESRNEKYFRLEDGRILCLECMESAITDTGECQPLYHAIRDYYEGMNMRIDQQVPMLLVGREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSVHRWPRVGGNRLTGMRTQPQRLTRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNLDVEEGICQVLSYMWLEAEVMPRQPNYRSMPSTSAASSSSSSSSSKKGERSQVENKLGAFFIHQIANDSSAAYGGGFRAANEAVNKYGLRCTLEHIRLTGQFPL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0632 509 Gene3D Cysteine Rich Protein 138 202 - -
Lal11g0632 509 ProSitePatterns LIM zinc-binding domain signature. 143 177 IPR001781 -
Lal11g0632 509 MobiDBLite consensus disorder prediction 431 454 - -
Lal11g0632 509 CDD LIM_DA1 143 195 - -
Lal11g0632 509 Pfam Protein DA1 292 504 IPR022087 -
Lal11g0632 509 ProSiteProfiles LIM domain profile. 141 201 IPR001781 -
Lal11g0632 509 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 138 168 - -
Lal11g0632 509 Pfam LIM domain 143 197 IPR001781 -
Lal11g0632 509 PANTHER PROTEIN DA1-RELATED 2 21 509 IPR045218 -
Lal11g0632 509 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 21 509 - -
Lal11g0632 509 SMART lim_4 142 194 IPR001781 -
Lal11g0632 509 MobiDBLite consensus disorder prediction 431 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0632 Lal-Chr11 5344791 5351435 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal11g0632 DA1-like 1.1e-97 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0632 - - gmx:100798829 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0632 11 5344791 5351435 Lal11g0632 11 5344791 5351435 ECH