Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0628 ATGGCGAATTGGTGGACTGGGAATGTTGGTGGTATGAGACAAACAGATTCAATTTCATCATCTCCATCACTTCAGCAGAGAAGAGAGCAAGAATTCATGGACAACAACAACAACACCAACACCAACAACTCTCCTCCAACCAATAGCAGCAACAGCAACACTAACCCAAACACAACAGAAGATGATGAAAGCCGAGACACCGGTCACGAAGGCGGCGATGATCAGAACATCGGCAACCACGATGATGGGAATCCTGGCAGCAGCAGCCGGAGGCCACGTGGAAGGCCACCGGGGTCAAAGAACAAACCAAAACCACCAATTGTGATTACCAAAGAGAGTCCCAACGCGCTGCGAAGCCACGTGTTGGAAATCAGTAGTGGTAGTGATGTAGTTGAGACAATTGCCACCTTTGCTAATCGCCGTCACCGAGGCGTGTCAGTGCTTAGCGGGAGTGGCATTGTTACCAATGTCACTCTCGGGCAACCGACCGCTCCCGGTGGGGTTATAACACTTAATGGGAGGTTTGAGATTTTGACTCTATCCGGCGCATTTTTACCTGCTCCTTCCCCACCTGGGGCGACACGACTGACTGTGTACTTAGCCGGTGGTCAAGGACAGGTGGTTGGTGGAACTGTGGTAGGTTCGTTGGTGGCATCGGGGCCTGCAATTGTAATTGCTGCTACTTTTGCTAATGCTACTTATGAGAGATTGCCACTAGAGGATGAACAAGGTGATGAGGAAATGCAAGTGGCAGGGATTGGAACTGGTGGAACTTCTGCATCTCAAGGTTTGGGTGAACAGGTTTCAATGCCAGTGCCAGTGCCAATGTATAACTTGCCTCCAAATTTGGTACACAATGGTCAATTGCCTCATGATGTGTTCTGGGGACCTCAACCACCTCGTCCTCCAACTTCTTACTGA 921 0.4995 MANWWTGNVGGMRQTDSISSSPSLQQRREQEFMDNNNNTNTNNSPPTNSSNSNTNPNTTEDDESRDTGHEGGDDQNIGNHDDGNPGSSSRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEISSGSDVVETIATFANRRHRGVSVLSGSGIVTNVTLGQPTAPGGVITLNGRFEILTLSGAFLPAPSPPGATRLTVYLAGGQGQVVGGTVVGSLVASGPAIVIAATFANATYERLPLEDEQGDEEMQVAGIGTGGTSASQGLGEQVSMPVPVPMYNLPPNLVHNGQLPHDVFWGPQPPRPPTSY 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0628 306 Gene3D - 117 252 - -
Lal11g0628 306 MobiDBLite consensus disorder prediction 59 77 - -
Lal11g0628 306 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 302 IPR014476 GO:0003680
Lal11g0628 306 CDD DUF296 118 193 IPR005175 -
Lal11g0628 306 MobiDBLite consensus disorder prediction 1 58 - -
Lal11g0628 306 PIRSF ESCAROLA 12 305 IPR014476 GO:0003680
Lal11g0628 306 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 242 - -
Lal11g0628 306 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 37 302 - -
Lal11g0628 306 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 230 IPR005175 -
Lal11g0628 306 MobiDBLite consensus disorder prediction 1 114 - -
Lal11g0628 306 ProSiteProfiles PPC domain profile profile. 114 251 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0628 Lal-Chr11 5286119 5287039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0628 90 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.462 7.72e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0628 - - qsu:112039774 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0628 11 5286119 5287039 Lal11g0628 11 5286119 5287039 ECH