Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0598 ATGATGCTGCAACTCAAGCTAATGGCCTTAACCTTATTAACATGGTGGAGCAGTAATAATAATCATGGTGCTGTTGCAGACTCATCTGGTGTAACATTTCTACTTAACTTTAACTGCAATCAAGTGAACGTAACCATTAATGTGGGCACCTTCTTTGATAGTATCAAAGGTTCTATTTCAGAACTTAGAGCAAAGGTTATCAATGAAAGCATGCATTTTGCAACAGCAGAAGAAGCTAGGGGAGAGACCCTTGTATATGCTATGTTTCAGTGCAGAAATTACCTATCCATAAATGAATGTCTTGCTTGCTTTGACACTGCTGAGACCCAAATCCAGAAGTGTTATGCTGCCAAAGGTGCTAGAGTTATCTACAATGGCTGCTTCCTCAGGTACGAGGATGAGAAGTTTTATGATAAAATCACTGAACCTGGCAATGGTGTCTCATGTGGGAAAAGGATTGCAGAGAATGTGATTCCTTTTAATGCAGCTGCAAAACAAGTGTTAATTGATCTACCAATAGCAACACCAAGAATTAAAGGTTTTTATGCAGCTACAAAAACACAAGTCGGTGGAAGTGCAATTTACACCATTGCACAATGTATTGAAACTGCAAAAGTTAGTGATTGCTTAGCTTGCATGATAGTTGGATACAGCAACATACACACTTGTCTTCCCTATACAGATGGTATGGCATATGATGCTGGTTGTTTCATGAGATATTCCCAGACACCATTCTTTGCTGATAATCAAACCATTGATATCACACCCTATTTACAACAAGGTGACATATTAAGAGCAACCGAGTTGATAGGTCCAATAAACTACAAATATGAAGATTTGAAAGCTGCAACAAAAAACTTCAGTATTAAATATAAACTAGGAAAAGGAGGCTTTGGCAATGTATACAAGGGAACACTGAAAAATGGAAAAATCATTGCAGTTAAGAAATTAATTTTGAGCCAATCTAGCAACATAGATGATGATTTTGAGAGTGAAGCAAAGCTTATAAGTAATGTTCATCATAGAAATCTTGTTAGACTTCTTGGTTGCTGCAATGAAGGCCAAGAGAGAATTCTTGTTTATGAATACATATCAAACACAAGCCTTGACAGATACTTATTTGGTAACAAAAAAGGTTCCCTCAACTGGAAACAAAGGTATGATATAATTTTAGGCACAGCAAGAGGATTGGCATATTTACATGAAGAATTTCATGTGCCCATTATTCATAGAGATATAAAGACCACAAATATTTTCTTGGATGATGATCTTCAACCCAAAATTGGTGATTTTGGTTTGGGTAGAGATATAACTCATCTGAACACAAGATTTGCAGGAACTTTGGGATATACAGCACCGGAGTATTCAATCCATGGTCAATTATCAGAGAAAGCTGATATCTACAGCTATGGTGTTGTAGTCCTTGAAATAATAAGTGGCCAAAAGAGTACTGAAGTCAAGCTTGATGATAATGTTCATGAATACCTTCTTCAACGAACATGGAAATTGTATGAGAGAGGCATGCATTTGGAGCTGGTGGATAAGGACTTAGAATCTAAAGAATTTGATGCTGAAGAAGTAAAGAAAATCATAGAGATTGCTTTATTGTGCACTCAAGCATCAGCTGCAATGAGGCCAACAATGTCTGGAGTAGTAGTTTTACTCAAACGCTAG 1674 0.3692 MMLQLKLMALTLLTWWSSNNNHGAVADSSGVTFLLNFNCNQVNVTINVGTFFDSIKGSISELRAKVINESMHFATAEEARGETLVYAMFQCRNYLSINECLACFDTAETQIQKCYAAKGARVIYNGCFLRYEDEKFYDKITEPGNGVSCGKRIAENVIPFNAAAKQVLIDLPIATPRIKGFYAATKTQVGGSAIYTIAQCIETAKVSDCLACMIVGYSNIHTCLPYTDGMAYDAGCFMRYSQTPFFADNQTIDITPYLQQGDILRATELIGPINYKYEDLKAATKNFSIKYKLGKGGFGNVYKGTLKNGKIIAVKKLILSQSSNIDDDFESEAKLISNVHHRNLVRLLGCCNEGQERILVYEYISNTSLDRYLFGNKKGSLNWKQRYDIILGTARGLAYLHEEFHVPIIHRDIKTTNIFLDDDLQPKIGDFGLGRDITHLNTRFAGTLGYTAPEYSIHGQLSEKADIYSYGVVVLEIISGQKSTEVKLDDNVHEYLLQRTWKLYERGMHLELVDKDLESKEFDAEEVKKIIEIALLCTQASAAMRPTMSGVVVLLKR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0598 557 Gene3D Transferase(Phosphotransferase) domain 1 364 557 - -
Lal11g0598 557 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 259 556 - -
Lal11g0598 557 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 24 255 - -
Lal11g0598 557 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 255 - -
Lal11g0598 557 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 259 556 - -
Lal11g0598 557 Gene3D Phosphorylase Kinase; domain 1 261 363 - -
Lal11g0598 557 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
Lal11g0598 557 Gene3D - 31 136 IPR038408 -
Lal11g0598 557 Gene3D - 147 245 IPR038408 -
Lal11g0598 557 ProSiteProfiles Gnk2-homologous domain profile. 141 245 IPR002902 -
Lal11g0598 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Lal11g0598 557 ProSiteProfiles Protein kinase domain profile. 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0598 557 Pfam Protein kinase domain 288 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0598 557 Pfam Salt stress response/antifungal 157 242 IPR002902 -
Lal11g0598 557 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Lal11g0598 557 SUPERFAMILY Protein kinase-like (PK-like) 269 554 IPR011009 -
Lal11g0598 557 CDD STKc_IRAK 293 557 - -
Lal11g0598 557 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Lal11g0598 557 SMART serkin_6 287 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0598 Lal-Chr11 4863084 4867549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0598 73 556 Receptor kinase-like Gene Family AT1G70520 36.940 1.24e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal11g0598 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0598 - - gmx:100801131 764.222