Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0582 ATGTCCGTACAATCAACTCTTAACCTCCATGAAAAAGAAAGGTCCCATTTTGACGGTGACCCACCATGCAAAACCATGAACAAACTCCACCACCATCATCACCACCGCAAGAAGCTCCTCCGGATTATACTCACCGACCACGACGCTACAGATTCTGAATCCTCCGGCGACGATGAAAACTCACCTAAGCTTCGGAGAGTGAAGAGGGAAATCACCCACGTCACCATCAACTTTCCCTCTTCACATTCTTCTTCATCAACTACTTCACTTCCTAGTACTCCATCTTCTTCATTTTCATCGGGTCATAACCCGACCCGTTTCAGGAAAAGTGTGACCCGACCCAGAAGGAATGTCACGGTTGCCTCTCGTCGCCGCGGCAAGTTCAGGGGTGTTCGCCAGAGGCCGTGGGGACGGTGGACCGCCGAGATCCGTGACCCGAATCAGAGGAAACGGGTCTGGCTTGGGACATACGATACGGCGGAGCAAGCTGCCGCCGTGTACGATGAGGCTGCTGTGAAGTTGAAGGGTCCCAAAGCTGTCACTAACTTCCCTCACGTTGCTCCACAGAAGATTGAGGAAGTGGCGGCGGTGCCGATTTCTCGCGACGGGTTTGCTTCTCCGACGTCGGTGCTGGCTAACGATGGTGATGCGACGCCGTTTGATAGTTTCCGATATGACGTGGTGGATGCATTTGGATTTGATATCGAGGTTCCGTTGAGTCTAACGGACGTTAACACGGTGATGCTGAGTCAGCAGTTTGGGAATGTTCAGTTTGGAGATTTTGATTCCGATGAGTTTTTAAGGTGGCTCACTTAA 816 0.5159 MSVQSTLNLHEKERSHFDGDPPCKTMNKLHHHHHHRKKLLRIILTDHDATDSESSGDDENSPKLRRVKREITHVTINFPSSHSSSSTTSLPSTPSSSFSSGHNPTRFRKSVTRPRRNVTVASRRRGKFRGVRQRPWGRWTAEIRDPNQRKRVWLGTYDTAEQAAAVYDEAAVKLKGPKAVTNFPHVAPQKIEEVAAVPISRDGFASPTSVLANDGDATPFDSFRYDVVDAFGFDIEVPLSLTDVNTVMLSQQFGNVQFGDFDSDEFLRWLT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0582 271 MobiDBLite consensus disorder prediction 75 120 - -
Lal11g0582 271 SUPERFAMILY DNA-binding domain 127 185 IPR016177 GO:0003677
Lal11g0582 271 CDD AP2 127 186 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 31 267 - -
Lal11g0582 271 MobiDBLite consensus disorder prediction 9 26 - -
Lal11g0582 271 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 PIRSF PTI6 20 271 IPR017392 GO:0003700
Lal11g0582 271 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE 31 267 - -
Lal11g0582 271 Gene3D AP2/ERF domain 126 186 IPR036955 GO:0003700|GO:0006355
Lal11g0582 271 MobiDBLite consensus disorder prediction 75 107 - -
Lal11g0582 271 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Lal11g0582 271 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0582 Lal-Chr11 4691197 4692012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0582 38 211 AP2-EREBP Transcription Factor Family AT4G27950 43.850 1.79e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal11g0582 AP2 6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0582 K13434 - gmx:102660028 286.96