Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0576 ATGGCAGACGAAGCACACAATGATATGAAGGAGGAGGTCCCTGAAGTTGTGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAATTACAATTCTGGATCCTGCTGATGATCCAATAGATAAATTGGCTGAAAAGACAGAAAATTTGTCAGTTAGCTTTTCATCTGCAGTCTCTGAAGGTGTTGAGAGTACATTTGCTGGTTTGAAAAAGAAGAAAAAGAAGCCGGTTGAAATCAGTAACTTAAATGATGAGAGTGGAGATGTAGCTGAAGATTTGGATGCCTTAGATCCTGCTGAAGAAGATGAAGGAGATATTGCTTCTTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAGTATGAGGAGCTTCTGGGCAGGGTGTTTAACATTCTACGCGAGAATAATCCAGAACTTGCTGGAGACCGGCGGAGGACAGTTATGAGGCCTCCACAAGTTCTTCGTGAAGGCACGAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCCTGCTTGCTGAGTTGGGTACAAGTGGCTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGGCGTTATATCAATGAATATGTCATTTGCCTCGGATGCAAAAGTCCCGACACAATACTTAGTAAGGAGAACCGTCTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCGATCAAGGCTGGTTTCGTTGCCCGCGTTGGCCGTAGGAACGCCGGAACATGA 831 0.4428 MADEAHNDMKEEVPEVVPFDPTKKKKKKKITILDPADDPIDKLAEKTENLSVSFSSAVSEGVESTFAGLKKKKKKPVEISNLNDESGDVAEDLDALDPAEEDEGDIASLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0576 276 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 225 260 IPR016190 GO:0003743|GO:0006413
Lal11g0576 276 MobiDBLite consensus disorder prediction 1 30 - -
Lal11g0576 276 SMART eIF2Bneu4 146 255 IPR002735 GO:0003743|GO:0006413
Lal11g0576 276 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 276 - -
Lal11g0576 276 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 121 228 IPR016189 GO:0003743|GO:0006413
Lal11g0576 276 Pfam Domain found in IF2B/IF5 145 254 IPR002735 GO:0003743|GO:0006413
Lal11g0576 276 MobiDBLite consensus disorder prediction 1 22 - -
Lal11g0576 276 Gene3D - 119 261 - -
Lal11g0576 276 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 276 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0576 Lal-Chr11 4651793 4656097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0576 1 272 Eukaryotic Initiation Factors Gene Family AT5G20920 75.000 6.26e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0576 K03238 - gmx:100783618 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0576 11 4651793 4656097 Lal11g0576 11 4651793 4656097 ECH