Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0574 ATGCACTCTCTCTCCTCTATCTCTATCCTTCTCTCTCTACACAATCACCTTCAATCCCATACACACGCTTTAATCAAGTTGAATTTTAGATTGATGGGTTCAGAGATTTGCGTGAAAGTTCCATGTGTGCACGATTGGAAGAAGGGGTGGCCTCTGCGATCTGGTGGGTTTTCTCAACTATGCATCAAGTGCGGAGTCATGGAGGAATGGAAGCGTGGGATTCTCGATCCATTATCTGCTTATGAGATGTCAGTTTTTTGTAATAACTTTCATCGTCAAAAAACTGGATGGATGGAGTGTAAACTTTGCAACAAGCCTATTCACTGTGGATGCGTAGTATCTAGATCTTTGTTCGAGTACCTTGACTTTGATGGCATAGGTTGTGTTAGCTGTGTAGCTTCCCAACTTCGTATGACGAGGAATACTGAAAATCCTAATGGGTCTATTTCATCAACCAAAAATAATGCAAGTGATCAGCAATCTGCTCTTATTGATGGAACACTGTTTGTGGATAGTGTTGATGAAGGAAAACTTATGCAATTGTGCAGAATTGTTGAAGCTAGTGAGCCCAGCCATTGGAATAATGCTCAGAGAGATAGCATAATATCATGTAGTGGGCAAAACATCCAAGAAGTGAAGTGTTCATTTGGAGAAGTGGATACGGGATTTTCGAATGTGTTTAAACCACCGGTTCAGTCACTAATATTTTCTAAATTCGAAAATAATATATCAACATGGGAGATTAAGAACACACATGAATCAACTGCACAACCATCTTTGAATATGTATCTGGGAAACCCATCAGGGAACAACACTGTCCTGCCTCCATCTGCTGGAGAGATCGTAGATGCAAGAGTTGAGGGCAAAGCATCTCCTCCCTTTCATCAAGGGCAAAGATCTCGCCCTATATTGCCCAAACCATTGAAGATTGGGCTGTCCATGAATCCGGAAACAGATAAAGGAGCAATATCTCATGCACGAATTGCTCGGCCACCTGCTGACGGGAGGGGAAAAAGTCAGTTACTTCCTCGATATTGGCCCAGGATCACTGATCAAGAGCTGGAACGATTGTCTGGAGATTTGAAGTCAACTGTGGTGCCTTTATTTGAGAAGATATTGAGTGCCAGTGATGCAGGTCGAATTGGTCGCCTTGTTCTCCCAAAAGCCTGTGCTGAGGCTTATTTTCCTCCGATTTCGAATTCTGATGGTCTTCCTTTGCGGGTTCAAGATGTGAAAGGGAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGGCCATGCAATTATGTGCTGGTGATACTGTAACATTTAATCGGATAGATCCTGGGGGCAAACTTGTTGTGGGATTCAGAAAGGCATCGAATTCTATAGATACACAGGATGCTTCTACATCTTCCCTTTGTAATGGCATTTCAACAAAGGTAACAACCAATTCCGGTGGAACTGAGAATCTGCTGTTGGATAGCAGTTATGCTGATCTTCTCCAGTCGATAAAAGGGAATGGGGAATCCAACTTAAATGGACATCCGAAACATCTTGATTTGGGTGCTGGAGCTGTTGGTTTTCTTACAACAGAAAATTGCGAGAAAACAAACAATCATTCACTGCACCAACCAATTCCACTTTCAGAGAAGAAAAGGACTCACAATATTGGGCCTAAAAGCAAGAGGTTGCGCATTGATAACGAAGATGCTATGGAGTTGAGACTGACATGGGAAGAAACACAGCATTTGCTTCGTCCGCCGCCAAGTGTCCAGCCAAGCATTGTCACAATTGAGGACCAAGTAATTGAAGAATATGAGGTAAGCACGATAATTTCCGATGAGCGTGTCCTCTTCTTTGGTAGGTTGGCTATTACAAGGAACCACCGGTTTTCGGAAAGAGAACTATATTCTGTGCCTGCTCATCTGGGTAAGAATACACCACTTTTTGCATACTTAGCATTGTATTCTGGCACTGTAGAAAGTCTTGACCAGTCAGTATTTGTTTATTACTCGGTCTTTCCTGTGAATTTGTTGAAACAAATCATAACAGTCTGGGGCAAAGAACAATGGGCTCAATGTGATGATTGCTCTAAATGGCGAAGGCTTCCAGTCGATGCTCTTCTTCCTCCCAAGTGGACGTGTTCCGAAAATGGTTGGGATGGAAGCAGGTCTTCATGTTCCGTGCCAGAGGAGATGAGTTCAAGGGAATTAGAAAATCTTTTGAAACCCAACAAAGATTTTAAGAGGAGAAGAACTCTAGAAAATGGTAAGTCGGTAAAAGAGCACGAGCCTTCTGGATTAGATGCTCTTGCCATTGCAGCAGTTTTAGGAGAAAACCTTGACGACCCTGCCGAGTCATCAGCTGGAGCCACCACAAAACATCCTAGACACCGTCCCGGTTGCTCTTGTATTGTCTGCATCCAGCCCCCTAGTGGAAAGGGGAGACATAAACCAACCTGTACTTGCAATGTGTGCATGACTGTAAAACGGCGATTCAAAACCCTCATGCTACGAAAAAAGAAACGCCAGTCGGAACGCGAAGCAGATGCTGCTAAAGAAGATCATAATCACCACAGAGACGAGTCAGAAGCCAATGGAGCATCAAAATCAAAAGATGATACAAGCCATTTGGAGAAAGAGGGAGGCCGAGGTCAACCCGAGGCGGGTGAGTCCAGTGCTGGACAAATAGACTTAAATTCGCACCCGAATCACGCCGATACACAAATGGATGATATTACAGGACTTAGCTTGTCTATTAATCATCTTGAAATTACAAACCATCAGGTAAGGGAATTTATGAGCCCAAATGATCTAAAAAGCTTCAATAGTGAAGTGCAGGCTGATCAACATTCTTTATTACTCAAAAGTCAAAACAATCTTTCTTCACAGTTGATTTAG 2931 0.4299 MHSLSSISILLSLHNHLQSHTHALIKLNFRLMGSEICVKVPCVHDWKKGWPLRSGGFSQLCIKCGVMEEWKRGILDPLSAYEMSVFCNNFHRQKTGWMECKLCNKPIHCGCVVSRSLFEYLDFDGIGCVSCVASQLRMTRNTENPNGSISSTKNNASDQQSALIDGTLFVDSVDEGKLMQLCRIVEASEPSHWNNAQRDSIISCSGQNIQEVKCSFGEVDTGFSNVFKPPVQSLIFSKFENNISTWEIKNTHESTAQPSLNMYLGNPSGNNTVLPPSAGEIVDARVEGKASPPFHQGQRSRPILPKPLKIGLSMNPETDKGAISHARIARPPADGRGKSQLLPRYWPRITDQELERLSGDLKSTVVPLFEKILSASDAGRIGRLVLPKACAEAYFPPISNSDGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLCAGDTVTFNRIDPGGKLVVGFRKASNSIDTQDASTSSLCNGISTKVTTNSGGTENLLLDSSYADLLQSIKGNGESNLNGHPKHLDLGAGAVGFLTTENCEKTNNHSLHQPIPLSEKKRTHNIGPKSKRLRIDNEDAMELRLTWEETQHLLRPPPSVQPSIVTIEDQVIEEYEVSTIISDERVLFFGRLAITRNHRFSERELYSVPAHLGKNTPLFAYLALYSGTVESLDQSVFVYYSVFPVNLLKQIITVWGKEQWAQCDDCSKWRRLPVDALLPPKWTCSENGWDGSRSSCSVPEEMSSRELENLLKPNKDFKRRRTLENGKSVKEHEPSGLDALAIAAVLGENLDDPAESSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMLRKKKRQSEREADAAKEDHNHHRDESEANGASKSKDDTSHLEKEGGRGQPEAGESSAGQIDLNSHPNHADTQMDDITGLSLSINHLEITNHQVREFMSPNDLKSFNSEVQADQHSLLLKSQNNLSSQLI 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0574 976 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 670 959 - -
Lal11g0574 976 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 34 621 - -
Lal11g0574 976 MobiDBLite consensus disorder prediction 851 896 - -
Lal11g0574 976 Pfam CW-type Zinc Finger 700 742 IPR011124 GO:0008270
Lal11g0574 976 SMART B3_2 369 470 IPR003340 GO:0003677
Lal11g0574 976 Gene3D - 347 474 IPR015300 -
Lal11g0574 976 ProSiteProfiles B3 DNA-binding domain profile. 369 470 IPR003340 GO:0003677
Lal11g0574 976 ProSiteProfiles Zinc finger CW-type profile. 690 745 IPR011124 GO:0008270
Lal11g0574 976 CDD B3_DNA 367 468 IPR003340 GO:0003677
Lal11g0574 976 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 34 621 - -
Lal11g0574 976 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 670 959 - -
Lal11g0574 976 MobiDBLite consensus disorder prediction 847 920 - -
Lal11g0574 976 Gene3D - 698 753 - -
Lal11g0574 976 Coils Coil 852 872 - -
Lal11g0574 976 MobiDBLite consensus disorder prediction 903 920 - -
Lal11g0574 976 SUPERFAMILY DNA-binding pseudobarrel domain 367 470 IPR015300 -
Lal11g0574 976 Pfam B3 DNA binding domain 369 469 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0574 Lal-Chr11 4619315 4627443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0574 32 919 B3 DNA Binding Superfamily AT2G30470 41.899 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal11g0574 B3 7.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0574 - - gmx:100789848 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0574 11 4619315 4627443 Lal11g0574 11 4619315 4627443 ECH
Lal5g1264 5 15366268 15375048 Lal11g0574 11 4619315 4627443 LSH
Lal3g0463 3 3173838 3181383 Lal11g0574 11 4619315 4627443 LSH
Lal11g0574 11 4619315 4627443 Lal22g0318 22 2017991 2024359 PCT
Lal11g0574 11 4619315 4627443 Lal6g0350 6 2213676 2220066 PCT
Lal22g0318 22 2017991 2024359 Lal11g0574 11 4619315 4627443 PCT
Lal6g0350 6 2213676 2220066 Lal11g0574 11 4619315 4627443 PCT