Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0554 ATGTCGGACTTCCCCGATTCCATGACGCCTCCGGCCACCAACCACCGCTCCCTCCCCGTCCGCGAGGACTGTTGGACGGAGGAAGCCTCTTCCACCCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAAAAGGACTGGCAGGACGTCGCGGACGCCGTTAACGCCCTCCACGCCCACTCGAAGAAAACGCACCGCACCGATGTTCAGTGCAAGAACCGCATTGACACCATCAAGAAGAAATACAAGGTCGAGAAAGCTAGGGTTGCATCATCAAACGGTGCCGTTTCGTCTTCTTGGCCTTTCTTCGAACGATTAGACTCTCTGATTGGCCCTAACTTCATTGCAAAAATATCCACATCTTCCCCTTCGTTGTCTCCACCGGTAGCTCTTCCTCTCTTGCCTTATCGTAAAACTCAGTCCCCGGTGGCTGCACCGTTTACCTCTGCCGTGCTGCCGCAGAAGCGGTCTGTATCAGCGGTGATGGATGATGGTTACTTTAGGAGAAATTATTCGGCAATGGCGGCTGCTGCGGCCGCTGCTGAGGCTGATGATGATGATGATGAGGAAGAAGATGATGAGGAAGAGGAGGAAGAGATGATGGAAGATGAAGGAAGAGGTAGTGAAGTGGAAGAAGGAGAGAGGGATAGGGGGAAAGATGGAATGAGAAGGTTGGCAAAGGCGATAGAGAGTTTCGGGGAAATGTATGAAAGAGTGGAGGAGAAGAAACTGAGGCAGTTGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGAGGTTGAAGTCCAGAGGATGCAGATGTTTATGGACACACAAGTTCAGTTGGAGAGGATTAAGCACGGGAAGACATCCGGTTCTAATATTTTGTTAGAAGGATAA 903 0.5227 MSDFPDSMTPPATNHRSLPVREDCWTEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHAHSKKTHRTDVQCKNRIDTIKKKYKVEKARVASSNGAVSSSWPFFERLDSLIGPNFIAKISTSSPSLSPPVALPLLPYRKTQSPVAAPFTSAVLPQKRSVSAVMDDGYFRRNYSAMAAAAAAAEADDDDDEEEDDEEEEEEMMEDEGRGSEVEEGERDRGKDGMRRLAKAIESFGEMYERVEEKKLRQLVDLEKQRMQFAKEVEVQRMQMFMDTQVQLERIKHGKTSGSNILLEG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0554 300 MobiDBLite consensus disorder prediction 184 229 - -
Lal11g0554 300 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 295 IPR044823 -
Lal11g0554 300 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Lal11g0554 300 PANTHER OS05G0560600 PROTEIN 7 295 - -
Lal11g0554 300 MobiDBLite consensus disorder prediction 188 214 - -
Lal11g0554 300 Coils Coil 229 249 - -
Lal11g0554 300 Gene3D - 25 91 - -
Lal11g0554 300 MobiDBLite consensus disorder prediction 215 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0554 Lal-Chr11 4455670 4462466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0554 21 294 Trihelix Transcription Factor Family AT3G14180 31.944 8.00e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal11g0554 Myb_DNA-bind_4 8.4e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0554 - - gmx:100785349 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0554 11 4455670 4462466 Lal11g0554 11 4455670 4462466 ECH
Lal5g1296 5 15655919 15663564 Lal11g0554 11 4455670 4462466 LSH
Lal3g0421 3 2913789 2916038 Lal11g0554 11 4455670 4462466 LSH