Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0547 ATGGCATCAGAGAAGAAATTATCGAACCCAATGAGGGAAATCAAGGTTCAGAAGCTTGTTCTCAACATCTCTGTTGGTGAAAGTGGTGATCGTCTTACCAGAGCCGCAAAGGTTTTGGAGCAATTGAGTGGCCAAAGCCCTGTGTTTTCCAAGGCTAGGTATACTGTGAGATCCTTCGGGATTCGGCGTAACGAAAAGATTGCTTGCTATGTCACTGTTAGGGGTGATAAGGCAATGCAGCTACTTGAGAGTGGATTAAAGGTTAAGGAGTATGAACTGTTGAGGAGAAACTTCAGTGACACTGGTTGTTTCGGATTCGGTATTCAGGAGCACATTGATCTTGGAATCAAGTATGACCCTTCAACTGGTATATATGGTATGGATTTCTATGTTGTTTTAGAACGCCCAGGATACCGTGTTGGTCGCCGCAGAAGATGCAAGGCCCGTGTTGGAATTCAGCACAGGGTGACCAAAGAGGATGCAATGAAATGGTTCCAAGTTAAATATGAAGGAGTTATTCTCAACAAGTCCCAACAAATTTCTTAG 546 0.4377 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0547 181 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal11g0547 181 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lal11g0547 181 Gene3D - 2 177 IPR022803 -
Lal11g0547 181 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal11g0547 181 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
Lal11g0547 181 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Lal11g0547 181 SUPERFAMILY RL5-like 8 173 IPR022803 -
Lal11g0547 181 Pfam Ribosomal protein L5 9 62 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0547 Lal-Chr11 4393716 4395470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0547 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.580 4.34e-130 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0547 K02868 - tcc:18596658 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0547 11 4393716 4395470 Lal11g0547 11 4393716 4395470 ECH