Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0520 ATGGCTTTTAAGCCTTTAGATTGGTATTGTCAGCCAGTTGCGCGTGGAGTATGGTCAACAGTAGTGGAGAATGCTTTTGGTGCTTACACTCCTTGTGCAGTCGACTCTTTGGTTATCTCTGTTTCTCAGTTGATACTTCTAGGCCTCTGCATCTACCGGATATGGTTGATTACGAAGGATTTTACAGTGAAGAGGTTTTGTTTGAGGTCCAAACTCTATAATTACATTCTGGGGTTGTTAGCTGCATATTGTGTGGCAGAACCTTTATTCAGATTGATCACGGGAATGTCAATTCTAAATTTAGATGGGCAGACTCATCTTGCTCCATTTGAGATAGTTTCGCTGATTGTTGAAGCTGTTACTTGGTGCTCTATGCTGATTTTGATTGGTGTCGAAACTAGAGTCTACATCCATGAATTCCGATGGTTTATCAGATTTTCTGTGATTTATAGTATCGTAGGGGATGTGGTTTTGTTCAATCTCATCATTTCTGTGAAGGAGTTCTATAGCAGATCTGTGCTGTATTTGTACATCAGTGAAGTGGTCTGCCAGGCTTTGTTTGGAATCCTTTTGCTAGTTTACATTCCTACTTTGGATCCTTATCCTGGTTATACCCCCATACGGAGTGAATTGGTTACTGATGCTGCATATGATGAACTTCCTGGTGGAGAGATGATATGCCCTGAAAGGCATGCCAACATATTGTCAAAAATATTTTTTTCTTGGATGAATCCCATCATGAAGCTAGGATATGAAAAACCACTTACAGAGAAAGACATATGGAAATTAGATACATGGGATAGAACTGAAACTCTGAACAACAACTTCCAGAGATGCTGGGCTGAAGAGTCCCAGAAGTCGAAACCTTGGCTTTTAAGAGCACTAAATGCAAGCCTCGGAGGAAGGTTTTGGTTTGGAGGCTTTTTTAAGATTGGCAACGATATTTCCCAATTTTTGGGGCCACTTATATTGAATCAGCTACTACAGTCTATGCAAAATGGTGATCCGGCCTGGATTGGCTACATTTATGCCTTCTCAATATTTGTCGGAGTGGTCTTTGGGGTGTTATGTGAAGGTCAATATTTTCAGAATGTCATGCGTGTTGGTTATCGGCTAAGATCAACTCTGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGTATTGTCATTGCATTGGTTCTTCTTTACCAACAACTAGGCGTTGCTTCACTCCTTGGTGCTTTGATGTTAGTTCTTATGTTTCCATTACAGACATTTACCATCAGTAGAATGCAGAAGTTTTCTAAGGAAGGATTGCAACGTACGGACAAGAGAATAGGTCTCATGAATGAAATTCTGGCTGCCATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGAATGTCCGAAATGATGAATTATCTTGGTTTCGGAAAGCATCATTACTTGGAGCGTTGAATGGATTTATTCTAAACAGCGTCCCTGTCGTTGTAACTGTGATTTCGTTTGGAGTTTTCACCTTGCTTGGAGGGGATTTGACACCAGCAAGAGCTTTTACATCACTTTCACTGTTTGCCGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACCCAGGTGGTTAATGCAAATGTATCTTTGAAGCGTCTTGAAGAGTTACTCTTGGCAGAAGAGAGAGTGCTTCTACCAAATCCACCTCTTGAGCCAGGGTTACCAGCCATTTCGATAAAGAACGGATACTTTTCTTGGGATGCAAAGGCAGACAGCACTACATTGTCAAACATAAACTTGGATATACCTGTTGGTAGCTTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTCGTATCTGCAATGCTTGGAGAACTTCCTCCAATTGCAGATTCAACTGCTGTTATGAGAGGGACAGTTGCTTATGTGCCCCAAGTTTCGTGGATCTTTAATGCAACTGTACGGGATAATGTTTTATTTGGTTCTGCCTTTGACCCTGCAAGGTATGGAAGGTCAATAGATGTGACTGAACTGAAGCACGATCTTGAGTTACTTCCTGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGTGGTGGTCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTTTACTCCAATTCTGATGTGTACATCTTTGATGATCCTCTAAGTGCTTTGGATGCGCATGTTGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTGGTTACAAATCAGCTACATTTCCTATCACAGGTTGATAGAATCATTTTGGTCCATGAAGGTATGGTGAAAGAGGAGGGAACATTTGAGGAGCTATCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCGGGAAAAATGGAGGAGTTCCAAGAAGAAAATATAGATATTGAAACCACTGATCAGAAGTTGTCTTCAGAACCGGTGGCCAATGGAGCACTTGCTGATCATGCAAAGAGTGGGAGTAAACCAAAAGAAGGAAAATCTATACTTATTAAACAGGAAGAACGAGAAACAGGTGTTGTCGGTTTGAATGTTCTAGGAAGGTACAAGAATGCATTAGGAGGATTTTGGGTAGTTTTTGTACTCTTTGGATGCTATGTCTTGACTGAGGTGTTACGAGTGTGCAGTAGCACATGGTTAAGCTATTGGACTGATCAGGGTACTTCAGTGGGATATAATCCTAGTTTCTACAATCTCATATATGCAGCTCTAGCATTTGGTCAGGTTATGGTGACTTTATCAAATTCTTTTTGGTTAATCTTATCAAGTCTTCGTGCTGCCCGAAAGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCTATGGTTTTTTTCCATACAAATCCACTCGGAAGGATTATCAACAGGTTTGCAAAGGATCAAAGTGACATTGATCGTAATGTTGCCCCATTTGTGAATATGTTTTTGGGTCAAATGTTCCAGCTCTTTTCAACATTCGTCCTGATAGGGATTGTCAGCACGATGTCCTTGTGGGCGATAATGCCATTGTTGGTGTTGTTTTATGGAGCATATCTATACTATCAGAGCACAGCCCGTGAAGTGAAGCGACTAGATTCAATTAGCAGATCTCCCGTTTATGCACAATTTGGAGAAGCACTTAATGGCCTATCATCAATTCGTGCTTATAAAGCTTATGATCGAATGGCTTATATAAATGGGAAATCCGTGGACAACAATATACGGTTCACTCTTGTGAACATGGGTGGAAATCGATGGCTCGGAATCCGATTAGAAACTTTGGGAGGCATCATGATATGGTTTACTGCAACCTTCGCTGTAATGCAGAATGGGAGGGCAGAGAACCAGCAGGAGTTTGCATCAACTATGGGATTACTACTTAGTTATGCTTTGAATATTACTACCTTGCTGACTGCTGTGCTCAGGCTTGCAAGTCTGGCTGAGAATAGTTTAAATGCAGTTGAGAGGATTGGCACCTATACAGATTTGCCTTCAGAGGCTCCATCAATCATTGATGATAACCGCCCTCCTCCTGGGTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTTCTTCGGTACAGGCCGGAACTTCCTCCTGTCCTGCATGGCTTGACTTTCACAATTTTTCCTACAGATAAGGTTGGCATTGTTGGGAGGACAGGAGCAGGAAAATCTAGCATGCTTAATGCTTTATTTAGAATTGTGGAATTGGAAAGAGGAAGAATATTGATTGATGATTGTGACATTGCAAAATTTGGACTGGCTGATTTACGTAAAGTTCTTGGAATTATACCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTTAACCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAAAGGGCACATTTGAAGGATGTGATACGGAGGAACTCTTTGGGACTGGATGCAGAGGTATCTGAGGCAGGGGAGAACTTCAGTGTTGGACAGAGGCAACTGTTGAGTCTTGCCAGGGCATTATTGCGGCGATCGAAGATTTTAGTACTAGACGAGGCAACTGCAGCAGTTGATGTTAGGACAGATGCACTCATACAAAAAACAATCCGAGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATCGACTCTGATCGGATTATTTTGCTTGATGGTGGCAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGATAGTGCTTTCTCTAAAATGGTGCGAAGTACAGGAGCTGCAAATGCTCAATACTTACGCGGCCTAGCACTTAGTGGGGACAAATCAGAAAGAGAACAAAACAAAAATCTAGAAGGCCATAGGAAATGGATGGCTTCTTCTCGCTGGGCTGCTGCTGCCAAATTTGCTCTTGCTACTAGTCTCACCTCGTCACAGAATGACCTGCAACGGTTGGAAATAGAAGATGAGCACAGTATTCTCAAGAAGACAAAGGATGCTGTGATAACTTTGCAGAGGGTTTTGGAAAGGAAACATGATAAAGAAATTGAGGAATCATTAGAGTGGCACCAAATATCCCCAGATGGATGGTGGTCATCACTTTACAAGATGATTGAAGGTCTTGCTATGATGAGCAGATTGAGCAGGAACAGGCTCCCTCAATCAGACTACAGTTTAGAGGATAGCTCAATTGACTTTGATCAACCTGACATGTAG 4752 0.4194 MAFKPLDWYCQPVARGVWSTVVENAFGAYTPCAVDSLVISVSQLILLGLCIYRIWLITKDFTVKRFCLRSKLYNYILGLLAAYCVAEPLFRLITGMSILNLDGQTHLAPFEIVSLIVEAVTWCSMLILIGVETRVYIHEFRWFIRFSVIYSIVGDVVLFNLIISVKEFYSRSVLYLYISEVVCQALFGILLLVYIPTLDPYPGYTPIRSELVTDAAYDELPGGEMICPERHANILSKIFFSWMNPIMKLGYEKPLTEKDIWKLDTWDRTETLNNNFQRCWAEESQKSKPWLLRALNASLGGRFWFGGFFKIGNDISQFLGPLILNQLLQSMQNGDPAWIGYIYAFSIFVGVVFGVLCEGQYFQNVMRVGYRLRSTLQICQSLHTLWSAPFRIVIALVLLYQQLGVASLLGALMLVLMFPLQTFTISRMQKFSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVQNVRNDELSWFRKASLLGALNGFILNSVPVVVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAISIKNGYFSWDAKADSTTLSNINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPPIADSTAVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPARYGRSIDVTELKHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSNQGPLFQKLMENAGKMEEFQEENIDIETTDQKLSSEPVANGALADHAKSGSKPKEGKSILIKQEERETGVVGLNVLGRYKNALGGFWVVFVLFGCYVLTEVLRVCSSTWLSYWTDQGTSVGYNPSFYNLIYAALAFGQVMVTLSNSFWLILSSLRAARKLHEAMLHSILRAPMVFFHTNPLGRIINRFAKDQSDIDRNVAPFVNMFLGQMFQLFSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSSIRAYKAYDRMAYINGKSVDNNIRFTLVNMGGNRWLGIRLETLGGIMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITTLLTAVLRLASLAENSLNAVERIGTYTDLPSEAPSIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLTFTIFPTDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDSDRIILLDGGKVLEYDTPEELLSNEDSAFSKMVRSTGAANAQYLRGLALSGDKSEREQNKNLEGHRKWMASSRWAAAAKFALATSLTSSQNDLQRLEIEDEHSILKKTKDAVITLQRVLERKHDKEIEESLEWHQISPDGWWSSLYKMIEGLAMMSRLSRNRLPQSDYSLEDSSIDFDQPDM 1583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0520 1583 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 380 547 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal11g0520 1583 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 881 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal11g0520 1583 CDD ABC_6TM_ABCC_D1 310 551 IPR044746 GO:0140359
Lal11g0520 1583 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 803 IPR003439 GO:0005524
Lal11g0520 1583 ProSitePatterns ABC transporters family signature. 1338 1352 IPR017871 GO:0005524
Lal11g0520 1583 CDD ABC_6TM_ABCC_D2 880 1176 IPR044726 GO:0140359
Lal11g0520 1583 Gene3D - 574 827 IPR027417 -
Lal11g0520 1583 ProSitePatterns ABC transporters family signature. 705 719 IPR017871 GO:0005524
Lal11g0520 1583 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 377 1477 - -
Lal11g0520 1583 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 35 376 - -
Lal11g0520 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1191 1433 IPR027417 -
Lal11g0520 1583 Pfam ABC transporter transmembrane region 881 1125 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal11g0520 1583 Pfam ABC transporter transmembrane region 385 535 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal11g0520 1583 SUPERFAMILY ABC transporter transmembrane region 878 1181 IPR036640 GO:0005524|GO:0016021
Lal11g0520 1583 CDD ABCC_MRP_domain1 579 779 - -
Lal11g0520 1583 CDD ABCC_MRP_domain2 1199 1419 - -
Lal11g0520 1583 SMART AAA_5 1227 1412 IPR003593 -
Lal11g0520 1583 SMART AAA_5 606 784 IPR003593 -
Lal11g0520 1583 Pfam ABC transporter 597 732 IPR003439 GO:0005524
Lal11g0520 1583 Pfam ABC transporter 1218 1366 IPR003439 GO:0005524
Lal11g0520 1583 Gene3D ABC transporter type 1, transmembrane domain 847 1182 IPR036640 GO:0005524|GO:0016021
Lal11g0520 1583 Gene3D ABC transporter type 1, transmembrane domain 280 564 IPR036640 GO:0005524|GO:0016021
Lal11g0520 1583 Gene3D - 1184 1437 IPR027417 -
Lal11g0520 1583 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1201 1435 IPR003439 GO:0005524
Lal11g0520 1583 SUPERFAMILY ABC transporter transmembrane region 289 559 IPR036640 GO:0005524|GO:0016021
Lal11g0520 1583 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 35 376 - -
Lal11g0520 1583 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 377 1477 - -
Lal11g0520 1583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 802 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0520 Lal-Chr11 4168547 4188391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0520 579 986 Calmodulin-binding Proteins AT2G36910 24.222 1.84e-28 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0520 - - gmx:100801762 2734.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1360 5 16258534 16278780 Lal11g0520 11 4168547 4188391 LSH