Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0514 ATGGAGAAGGATGATGAGATTGAAGCACAGACATGTAAGTTTCCAAGAATTGGAAATGGCTCAAAGAAGTTAGGTTCCACAAGAGGCAATGATGAAGAAGATAAAAGAAGAAGTAGTGATGGAAGCACAAACCATTTCAACAGTGGTAGCAGCAATTGGAACAATTCTTCAAGAATTGTGAGGGTATCTAGAGCCTCTGGTGGAAAAGACAGACACAGCAAGGTTATGACTTCAAAAGGGTTAAGAGATAGAAGAGTTAGGCTTTCTGTGACTACAGCAATTCAATTCTATGACCTTCAAGATAGACTTGGTTTTGAGCAACCTAGTAAAGCTGTTGAGTGGTTAATCAATGCTTCTTCAGATGCAATTTCAGAACTTCCTTCTCTCAACACCACTTTCCCTGATACTCCTAATCAACCAAGTGATGAGAAAAGGCCAAGTTTTGATGAAGACACAAACAACTATCACCAAAGCCAGAAACTTTCTTTGTCTAAATCTGCTTGTAGCAGCACTTCTGAGACAAGTAAAGGTTCTGGCTTGTCTTTATCAAGGCCTGAGATTTGTGTCAAAACAAGGGAAATAGGAAAAAAGGATAAAGAGAAAGAATATGAGTCATCTCATCACATTACAAATCATCATCACAATGTGACTGAAACTGCTTCTTTCACTGAACTTCTCACTGGTGGGATTGGTAATGTTCCTACTACTACAAGTGCTAATGCTAGTGATGAGTGTAATCTATTCAACAAAGCAAAACAATGGTCACCTATGGTTATGGACTACTTCAACAATACCCTTATGGTAGGACCATCATCTTCTTCAAGAAATGTTTCACTTTCACCATTTAGTGATGAAAACCATTCAGTTCAGCTTCAACATTTCTCTTTCATTCCTGACCATAATTTCATACCATGTTCTCAATCAAGTGAAAATCTCAACTTCACAATCTCTCCAACCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCAACCTCATCTTATGCATCATATGCAGAGGTTTTCTTCAACCATTGATGGATCAAACAATAATCTACCTTTCTTCATAGGAGGATCTTCTGCTTCTTCAACAATGGACACTAGTAGTAGTAACCATCATCAACAACAACAACTTCAGTTCTCACCTGTGTTTGATGGAAGCTTGCAACTCTGCTATGGTGATGGAACTCAGCATTCAGACCAGAAGGGGAAAGCCAAGAACTGA 1230 0.3894 MEKDDEIEAQTCKFPRIGNGSKKLGSTRGNDEEDKRRSSDGSTNHFNSGSSNWNNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGFEQPSKAVEWLINASSDAISELPSLNTTFPDTPNQPSDEKRPSFDEDTNNYHQSQKLSLSKSACSSTSETSKGSGLSLSRPEICVKTREIGKKDKEKEYESSHHITNHHHNVTETASFTELLTGGIGNVPTTTSANASDECNLFNKAKQWSPMVMDYFNNTLMVGPSSSSRNVSLSPFSDENHSVQLQHFSFIPDHNFIPCSQSSENLNFTISPTLAGYNRGTLQSNSQPHLMHHMQRFSSTIDGSNNNLPFFIGGSSASSTMDTSSSNHHQQQQLQFSPVFDGSLQLCYGDGTQHSDQKGKAKN 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0514 409 MobiDBLite consensus disorder prediction 127 141 - -
Lal11g0514 409 MobiDBLite consensus disorder prediction 26 41 - -
Lal11g0514 409 MobiDBLite consensus disorder prediction 42 57 - -
Lal11g0514 409 MobiDBLite consensus disorder prediction 1 57 - -
Lal11g0514 409 ProSiteProfiles TCP domain profile. 68 126 IPR017887 -
Lal11g0514 409 MobiDBLite consensus disorder prediction 127 182 - -
Lal11g0514 409 MobiDBLite consensus disorder prediction 197 214 - -
Lal11g0514 409 Pfam TCP family transcription factor 67 203 IPR017887 -
Lal11g0514 409 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 409 IPR005333 GO:0003700
Lal11g0514 409 MobiDBLite consensus disorder prediction 152 181 - -
Lal11g0514 409 MobiDBLite consensus disorder prediction 197 217 - -
Lal11g0514 409 PANTHER TRANSCRIPTION FACTOR TCP24 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0514 Lal-Chr11 4078535 4079764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0514 51 409 TCP Transcription Factor Family AT4G18390 41.895 7.29e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal11g0514 TCP 3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0514 - - lang:109333568 688.723