Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0507 ATGACATCTCAAGACAGTGAAAATTGGCCAACAGAATTTGTTAGAGATTTTGATGTACCATCTAATGACCATGATATTGAAGAACTACAAAGAGATCATTTGGGTCATGCTGAAAAAACCAATGACTCAACTCCTTACAATGGACAAATATTTAACTCTGAAGAAAATGCATACATTTTTTACTGTTTATTTGCAAAGAGATGTGGTTTTTATGTTAGAAGAGGTCACACTTATAAACGTAATGATTCAGATAACATTGAGTATATTTACAGAAGAGAGTTCATTTGTCATCGAGCTGGTATTGTCAACCAACAAAAAATTATTGAACCAGAAAAACAAAGGAAATGGAAAAGTTCAAGATGCAATTGTAGTGCAAAATTGTTTATTAGTAAAAGATCAATTAACTACGAAGAACGTTGGGTGGTTACATATTTTAGTAATTCTCATAACCATGCATTATTGGATGATAAAGAAGTTCGGTTTCTTCCTGCTTATCGTGACATACCTAACAATGATCAAAGTCGTATATTACTGTTATCTAAAGCTGGTTGCTCAATAAGTATTATAGTGAGAGTGCTTGAATTGGAGAAAGGAATAGAGGCAGGCCATTTGCCATATTTGGAGAAAGATATAAGAAATTTTTTACAATTTGAAAGTAGTGTTGATAATGAAAATGATGCTTCAGACATTCTCAAATTATGCAAAAAATTGAAAGATATAGACGATGCCTTTCAATATGATTTCACCATGGATGAAAGTAACAAATTGGAGCATATTATTTGGGTATTCAGTGATTCAATTCGAGCATATGAAGCTTTCGGAGATGTGGTTGTCTTTGATACTACATATCGAATAAATCGTTATGATATGCCTCTTGGACTATGGGTCGGGGTTGATAATCATGGTAATTCAATTTTCTTTGGATGTGTTCTATTGCGAGATGAGAAGATACCTTCTTTCAGATGGGCATTAAAGGTTGGAGTTGCCGTCGATATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCAAATTAGAACAAGCTTTCCCATCGAGGAACATGCTTCAAATATACTCACACCTTATGCCTTTGAGTTACTCCAACATGAAATTGAGTTATCTTCAAAATATGCAGCAACTAAAATTGACAATGACTCTTACATAGTGCGACATCATACCAATCTTAATGGAGGTCGATTGGTAAGTCTAATAAAAGAGAAAGATGAAGAATCAATTCGTTGTTCTTGTAGAGAATTTGAATTTTGTGGGATATTGTGTAGACATGCTATTCGAGTACGAAAGAGTTCATTGATCCCAAAATCTAGTCACATAACTATCTGCAATGATAACTCATCCATTGAGTTTCAGTCTATGATGCAATGCCTAGAAGTTGAAACTTTGAAGACAAAAGATCGAGTTGTAGTAGCTACTAAAGAATTAGAGCGAGTCATTGAGTTGGTAAAAAACATGTCTGTTGTTCCAAAACAATCAATTGATCTGGAAAATGATGTTAGAGATGATGTTGATGATTGCGATGTTGAGAATCCCATCACGTCGAAGACAAAAGGGGGAGTTGAAGTTGCAAAAAAGTCACGTCGTTGTCACTTTCCTAATTGTGGTGGAACGAATCATGACTCAAGAAATTGTCCAAACAAAAGGAAAAAATACTCATTGTTGAATTCTCAATCTCCTAATAAGTAA 1719 0.3426 MTSQDSENWPTEFVRDFDVPSNDHDIEELQRDHLGHAEKTNDSTPYNGQIFNSEENAYIFYCLFAKRCGFYVRRGHTYKRNDSDNIEYIYRREFICHRAGIVNQQKIIEPEKQRKWKSSRCNCSAKLFISKRSINYEERWVVTYFSNSHNHALLDDKEVRFLPAYRDIPNNDQSRILLLSKAGCSISIIVRVLELEKGIEAGHLPYLEKDIRNFLQFESSVDNENDASDILKLCKKLKDIDDAFQYDFTMDESNKLEHIIWVFSDSIRAYEAFGDVVVFDTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRDEKIPSFRWALKVGVAVDIRNQAGEEARMRQKYHNPQIRTSFPIEEHASNILTPYAFELLQHEIELSSKYAATKIDNDSYIVRHHTNLNGGRLVSLIKEKDEESIRCSCREFEFCGILCRHAIRVRKSSLIPKSSHITICNDNSSIEFQSMMQCLEVETLKTKDRVVVATKELERVIELVKNMSVVPKQSIDLENDVRDDVDDCDVENPITSKTKGGVEVAKKSRRCHFPNCGGTNHDSRNCPNKRKKYSLLNSQSPNK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0507 572 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 25 326 - -
Lal11g0507 572 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 330 440 - -
Lal11g0507 572 MobiDBLite consensus disorder prediction 551 572 - -
Lal11g0507 572 SMART 26again6 418 445 IPR006564 GO:0008270
Lal11g0507 572 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 326 IPR031052 GO:0006355
Lal11g0507 572 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 330 440 IPR031052 GO:0006355
Lal11g0507 572 Pfam FAR1 DNA-binding domain 60 154 IPR004330 -
Lal11g0507 572 Pfam SWIM zinc finger 401 438 IPR007527 GO:0008270
Lal11g0507 572 ProSiteProfiles Zinc finger SWIM-type profile. 405 443 IPR007527 GO:0008270
Lal11g0507 572 Pfam MULE transposase domain 276 325 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0507 Lal-Chr11 4012246 4014634 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0507 FAR1 3.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0507 - - lang:109341341 645.195