Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0492 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAAGGTGGGAGTAATGGGGTGAAGGAAGTAGTTGCAAAAAAAGAATCTTTCAAAGATGCTTCAATCTCTCAATCTCATTACCAAGATTCAAAATCACAAAGTGGCTCAGCTCCCAAGAAGGAAATACCAGTTCCAAAGGACGGGCAAACAGCGCATATTGCTGCTCAAACATTTACATTCCGTGAGCTTGCAGCTGCTACAAAGAATTTTAGACCAGAATGTTTGTTAGGCGAAGGAGGTTTTGGACATGTTTACAAAGGTCGCCTTGAGAACACAGGACAAGTTGTTGCTGTAAAACAGCTTGACCGAAATGGCCTTCAAGGAAATCGAGAATTTTTGGTGGAGGTTCTCATGCTCAGTCTCTTACATCACTCAAATCTTGTGAACTTAATCGGTTATTGTGCTGATGGTGATCAACGGCTTCTTGTTTATGAATTTATGCCACTGGGGTCTTTGGAGGATCATTTACATGATCTTCCACCTGACAAGGAGCCCCTGGACTGGAATACTAGGATGAAAATAGCAGCTGGTGCAGCAAAGGGATTGGAATATTTGCATGACAAGGCAAACCCCCCTGTGATATATAGAGACTTGAAATCATCGAACATCCTCCTAGATGAGGGTTATCATCCCAAGTTATCTGATTTTGGGCTAGCAAAGCTTGGTCCAGTTGGTGACAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAGTATGCTATGACTGGTCAATTAACTCTGAAGTCTGATGTCTACAGTTTCGGAGTTGTCTTCCTTGAACTTATTACGGGGCGCAAGGCTATTGATAATACACGTTCACATGGAGAGCATAATCTTGTTGCATGGGCGCGACCTCTCTTTAAAGATCGTAGGAAGTTCCCCAAAATGGCTGACCCACTACTTCAAGGCCGTTATCCAATTCGAGGGCTGTACCAAGCGCTTGCAGTTGCAGCAATGTGTTTGCAGGAACAAGCTGCTACAAGACCTCTTATCGGCGATGTAGTGACTGCTCTCACATATCTGGCCTCTCAAACATATGATCCAAATGCATCCAATCTGTCTAATAGGCTTGGTGGTTCATCAACTCCTCGGAGTAGAAACGGCAGAAGAAACATGGGAGACGGTGTGGATAGCCCAGACGGTGGACGGTTTGGCTCTCCTTCCTCCTACAGAAACTCACCTGATTACAGGAAGAGCCACAGCAGGAGTGTCTCTAATGATGGATCGGGGAGAAAATGGGGATTGGATGATATAGAAAGGCAGGAGTCTCGGAGAGATAGCCCTGTAAATACTGGAAGAGGTAGAGAGACTCCAAGGAACCGTGACCTGGACAGAGAACGTGCGGTGGCAGAAGCAAGAGTATGGGGTGAGAATTGGAGAGAAAAGAAGAGAGCAAATGGTATGGGCAGTTTTGATGCAACATATTAG 1482 0.4514 MGGCFPCFGSSNKGGSNGVKEVVAKKESFKDASISQSHYQDSKSQSGSAPKKEIPVPKDGQTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGHVYKGRLENTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRSHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPIRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNASNLSNRLGGSSTPRSRNGRRNMGDGVDSPDGGRFGSPSSYRNSPDYRKSHSRSVSNDGSGRKWGLDDIERQESRRDSPVNTGRGRETPRNRDLDRERAVAEARVWGENWREKKRANGMGSFDATY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0492 493 MobiDBLite consensus disorder prediction 367 465 - -
Lal11g0492 493 Gene3D Phosphorylase Kinase; domain 1 53 158 - -
Lal11g0492 493 SUPERFAMILY Protein kinase-like (PK-like) 65 356 IPR011009 -
Lal11g0492 493 MobiDBLite consensus disorder prediction 33 49 - -
Lal11g0492 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lal11g0492 493 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Lal11g0492 493 MobiDBLite consensus disorder prediction 367 386 - -
Lal11g0492 493 Gene3D Transferase(Phosphotransferase) domain 1 159 374 - -
Lal11g0492 493 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0492 493 PANTHER OS07G0668900 PROTEIN 1 487 - -
Lal11g0492 493 MobiDBLite consensus disorder prediction 30 58 - -
Lal11g0492 493 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 487 - -
Lal11g0492 493 CDD STKc_IRAK 88 357 - -
Lal11g0492 493 Pfam Protein kinase domain 87 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0492 493 MobiDBLite consensus disorder prediction 430 465 - -
Lal11g0492 493 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0492 Lal-Chr11 3835428 3841457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0492 62 361 Glycoside Hydrolase AT3G07070 75.333 6.98e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal11g0492 Pkinase 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0492 - - gmx:100814575 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0339 3 2247845 2252709 Lal11g0492 11 3835428 3841457 LSH