Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0487 ATGGGGTGTGTGTTTGGGAAGAACACTGCGGCGGAGGAGGAGGCGGAGGCGGAGGCGGAGACTGCAGGGGAGAAGGAGTGGGAGAGGAGGAGGGAGGAGAAGAGAGAGGAAGTGAAAGAAGCAAAATCACAAGTGGTTGAGGGTGAGACTGAGAATGGTGGTGGGAATCAGAAGGAGGATAGTGGTGGTGGTGGTGGTGGTGGAGAGGAGAAGAGGACTAGGCCTTCAAGGAGGCGATCTTCGAAGCCGAATCCGCGGCTGAGCAATCCACCTGGTCATGTTTATGGTGAGCAGGTGGCAGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATCAATGGATTGATTCCTAGAAGAGCTGATTCCTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTATAAAGCAAGGGATACTCTAACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGTTTTGACAATTTAGAGCCCGAGAGTGTGAAATTCATGGCCAGGGAGATTCTGATTCTGCGTCGTCTAGATCATCCAAATGTTGTCAAACTGGAAGGCTTGGTGACTTCTAGAATGTCATGCAGTTTGTATCTTGTGTTTGAATATATGGCGCATGATTTGGCTGGGCTTGCTACAAACCCAGCTATTAAGTTCACGGAATCTCAGGTTAAATGTTACATGCATCAGATATTTTCTGGGCTGGAACATTGTCACAACCGCCATGTGCTGCATCGTGATATAAAAGGGTCAAACCTCCTTATTGACAATGAAGGAGTTCTTAAGATTGCTGATTTTGGATTAGCTTCTTTCTTTGATCCTAATCACAAGCACCCTATGACTAGTAGAGTCGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGGGCTACCGAGTATGGTGTAGGAGTGGATCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTATTGGCGGGAAGACCTATTATGCCTGGTCGAACGGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGCGGTTCTCCTTCTGACGAATACTGGAAAAAGTCAAAGTTACCTCATGCTACCATTTTTAAGCCCCAACAGTCATACAAGCGGTGCATAGCGGAGATATTTAAAGATTTTCCACCATCATCCCTGCCACTAATCGAGACCCTTCTTTCAATTGATCCAGCTGAACGTGAAACTGCCACTGCTGCATTGCTTAGTGAATTCTTTACAACTAAACCTTATGCTTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGATACGGGATGAAGAAGCTAGAAGATTGAAAACAGCTGGTAAAGCTAATGTTGATGGTGTCAAGAAGTCTCGTCCACGTGATCGAGTCAGGAGAGGAATGCCGGTTCCAGAGGCCAATGCTGAACTGCAAGTGAACATTGACAGACGACGAATTATAACGCATGCTAATGCGAAGAGCAAGAGTGAGAAGTTTCCTCCTCCTCATCAAGATGGAACTCTAGGCTATTCTCTGGGTTCTTCACATCACATGGATCCAGGTTTTGACCCTCCTCATGTTGCATTTAGTTCCACAAACTTGTCACAACCGAAACCGAATATTCAAACCTGGTCCGGCCCATTGCTAGAACCTGCTCCTGTTGGTGCACCAAGGAGAAACAAGAAACATGGAAGGTGA 1695 0.4667 MGCVFGKNTAAEEEAEAEAETAGEKEWERRREEKREEVKEAKSQVVEGETENGGGNQKEDSGGGGGGGEEKRTRPSRRRSSKPNPRLSNPPGHVYGEQVAAGWPSWLSKVAGEAINGLIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTESQVKCYMHQIFSGLEHCHNRHVLHRDIKGSNLLIDNEGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAEIFKDFPPSSLPLIETLLSIDPAERETATAALLSEFFTTKPYACEPSSLPKYPPSKEMDAKIRDEEARRLKTAGKANVDGVKKSRPRDRVRRGMPVPEANAELQVNIDRRRIITHANAKSKSEKFPPPHQDGTLGYSLGSSHHMDPGFDPPHVAFSSTNLSQPKPNIQTWSGPLLEPAPVGAPRRNKKHGR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0487 564 MobiDBLite consensus disorder prediction 527 542 - -
Lal11g0487 564 MobiDBLite consensus disorder prediction 490 564 - -
Lal11g0487 564 MobiDBLite consensus disorder prediction 1 95 - -
Lal11g0487 564 Gene3D Phosphorylase Kinase; domain 1 115 208 - -
Lal11g0487 564 Coils Coil 24 51 - -
Lal11g0487 564 SUPERFAMILY Protein kinase-like (PK-like) 121 415 IPR011009 -
Lal11g0487 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Lal11g0487 564 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Lal11g0487 564 PANTHER CELL DIVISION PROTEIN KINASE 79 563 - -
Lal11g0487 564 SMART serkin_6 126 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0487 564 PANTHER CYCLIN-DEPENDENT KINASE 79 563 - -
Lal11g0487 564 Pfam Protein kinase domain 126 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0487 564 CDD STKc_CDK9_like 126 410 - -
Lal11g0487 564 Gene3D Transferase(Phosphotransferase) domain 1 209 450 - -
Lal11g0487 564 MobiDBLite consensus disorder prediction 22 46 - -
Lal11g0487 564 ProSiteProfiles Protein kinase domain profile. 126 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0487 Lal-Chr11 3795522 3801222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0487 121 448 Core Cell Cycle Gene Families AT5G10270 51.163 1.15e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal11g0487 Pkinase 3.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0487 K08819 - gmx:100779413 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0334 3 2183422 2190417 Lal11g0487 11 3795522 3801222 LSH