Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0480 ATGGATTGCAATAAAGAAGAGGCCTTAAGGGCCAGGGATTTGGCTGAAAAGAAGATGGAAAGCAAGGATTTTGCAGGGGCTCGTAAAGTTGCCCTTAAAGCTAAGCAACTATATCCTGATTTGGAGAATATCAGTCAAATTCTTATTGTTTGTGATGTGCATTGTGCTTCTGAGCATAAATTGAATGGCAATGCGATGGACTGGTATAAAGTTCTTCAAATTGAGTTGACGGCTAATGACACGACAATTAAGAAACAATACAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACCAGTTTCCTGGTGCAGAAGCTGCGTTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTCTTGGATAGCTTAAGCCGATCTAGGTTTGATGACATGTATCGTAGGGTTACAATGACCAGGAATGCTACACCATCTTATAATCTGCAGAAGGTTCCGATGAATTTTAATTCTGCAGTGCAAAGGAGTGTCAGGCCGGTATTTACAAACTTGAATCCTCAGCAACACCAACAGCCTGGACAGTCATCTCAGCAGGGTGGCCGTCCTACGTTTTGGACTTCCTGCACTTTTTGCTCCTTTAGATATCAGTATTACAGGGAAGTTTTAAATAGATCTCTTCGTTGTCAGAATTGCAATAAGCCGTTCATTGCATATGATGTGGATATGCAAGGTACAACTCCAGCAACTAATTCAACCCCGCAAACTTTTGGCCAGCAGAAATATGCTGTGAATCAAGGTACTTCCAATGCAGGTGTTGGATCTCAAGGTAATTTGAACACTAGGAAGACCAATTCACAGCCTTCTGAGAAAAAACGCTCTAGTATTGACACCTCTACAAAGCCAAATGGAAAGAGAAGGAAGAAGAAGGAAGAAAAATCCAGTGAATGTTCTGATTCTATAGGCAGCACGGATTCTGAAGATGATACATTTGCTGACAATGATAATTTTCCTGGTGTAGAAAAGTTTTCATCTAATAGAGAAGAGAACCCGCGTAGATCCACACGGCAAAAGCATCAGGTTTCCTACAAGGAGAATGTGAGTGATGATGATGATGATGACTCATTAAAACCTTCGAAAAGGAGCAAGGGGAACAGATCATCATCTGATGCTGATGAAAGTTGTCCACAGGCAGCTAAAGTGAATTACCAGTACGGTTCAGCTGCTGATACGAAAGATGACCAGAAAGAGGTCAAGGGTAAACATTCTGAAGAGAGCTTAGTAAATGGAGATGTGGAAATTAAAGAGACGAGGGGAAAAGAAGCAGTGGATGGCTCAAAGACTGATAAAGCTTCGGAGAGTACTTCTTTTGTCTTTCCTGATCCTGAGTTCAATGACTTTGAGAAGAAAGAAGAGTGCTTTGAGGTTGGGCAGATTTGGGCTATCTTTGACACAGCTGATGGCATGCCTAGATTCTATGCTATAATCAGAAAAGTGTTCTCTCAGGGATTCAAGGTGCGGATAACATGGTTAGAAGCTGATCCAGACGAAGATGATGAAATCCACTGGTTGAATGTGCAATTGCCAATTGCTTGTGGGAAATTTAAACTTGGTGCCACTGACACCACTAAAGATCATCTGATGTTCTCTCATTTGATTTGTTGTGAAAGGATCGGGCGCTCTACTTTTATAGTGTATCCAAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATCAAATGGTACATGGATGTCAAATCTCATCAGCAGTATGATTATGAATTTGTTCAAATCTTGTCAGATTATGTTGAAGGTGAAGGAGTAGCTGTTGCATACTTGGCTAAGTTGAAAGATTTTGTGAGTCTCTTCTCTCGAATTATGAAGGAAGGCAAACACTCAGTTCAAATTCCATCAGCAGAGTTACTTAAATTTTCTCACAGGGTTCCTTCTTTTAAAATGACTGGTGAGGAAAGGCTAGGTGTTCCTATAGGATCTTATGAACTTGATCCTGCATCCTTGCCTCAGAATCTGGAAGAGGTTGCTGTTCCTGAAGATGTGGAACTGGAGGTCGGTCATAATCCATTAGTTGGGATGAGTACAAAACCTGACGGCGATGCGTCTACTTCCAAGGCTAATTTGGAAAGCAGCGATTCAGCAGTGGAGACCAAGAATTCTGTTGATCTTAATGGTGGGAGTGCTCCTCCAGCTTCTTCCGTAGATGCTTTTGAAATTCCTGATCCTCAATTCTTCAATTTTGACACTCTGAGGTCACCTGAAAAGTTCCAGGTTGAACAGATTTGGGCATTTTATGGTGACGAAGATGGGCTGCCAAAATACTATGGTCGTATTAAGTCGGTTAGGACTAGCCCAGATTTTGAGCTAGAAATTAAATATCTTAGTAACTGCTGGCTACCAGAGGACACTATTGAATGGGAAGACAAGTACATGATTATTGCCTGCGGGGGATTCAACATTAAAGCACGTGGTAAAGTGAGTTTTTATAATAACACCCATCCTGTTTCGCATCAAGTGCACACTAGTACTGATGGCAAGAAAAAGGGATACACAATTTTGCCAAGGATAGGCGAATTTTGGGCCTTATACAGGAAGTGGACACCTAAACTCAAGTGTACAGATTTGGAAAAAATGGAGTATGATATTGTGCAAGTTGTCGGAGAAACTGATTTGTGGATAGATATCTCACTTATGGAGATGATAAGTGGTTATAGCTCAGTTTTCAAGGCCAAGTTCGATGAAGGATTAAATATGACCATGAGAATACCCATGAAAGAATTGCTCAGATTCTCACATCGGATCCCTGCTTTCAAACTGATAGAAGCATGCGACAATCTCAGAGGCTGTTGGGAGCTTGACCCCGGTGCAGTGCCTGTTCAGCATGCAAGGTTGCATTATCTGTTTTGTTTATTGAATGAGCTTAAGGCATGCAAGGTCTTGAACACATGCCATTCCAACAAATGA 2934 0.4145 MDCNKEEALRARDLAEKKMESKDFAGARKVALKAKQLYPDLENISQILIVCDVHCASEHKLNGNAMDWYKVLQIELTANDTTIKKQYRKFALQLHPDKNQFPGAEAAFKLIGEAQRVLLDSLSRSRFDDMYRRVTMTRNATPSYNLQKVPMNFNSAVQRSVRPVFTNLNPQQHQQPGQSSQQGGRPTFWTSCTFCSFRYQYYREVLNRSLRCQNCNKPFIAYDVDMQGTTPATNSTPQTFGQQKYAVNQGTSNAGVGSQGNLNTRKTNSQPSEKKRSSIDTSTKPNGKRRKKKEEKSSECSDSIGSTDSEDDTFADNDNFPGVEKFSSNREENPRRSTRQKHQVSYKENVSDDDDDDSLKPSKRSKGNRSSSDADESCPQAAKVNYQYGSAADTKDDQKEVKGKHSEESLVNGDVEIKETRGKEAVDGSKTDKASESTSFVFPDPEFNDFEKKEECFEVGQIWAIFDTADGMPRFYAIIRKVFSQGFKVRITWLEADPDEDDEIHWLNVQLPIACGKFKLGATDTTKDHLMFSHLICCERIGRSTFIVYPRKGETWALFKNWDIKWYMDVKSHQQYDYEFVQILSDYVEGEGVAVAYLAKLKDFVSLFSRIMKEGKHSVQIPSAELLKFSHRVPSFKMTGEERLGVPIGSYELDPASLPQNLEEVAVPEDVELEVGHNPLVGMSTKPDGDASTSKANLESSDSAVETKNSVDLNGGSAPPASSVDAFEIPDPQFFNFDTLRSPEKFQVEQIWAFYGDEDGLPKYYGRIKSVRTSPDFELEIKYLSNCWLPEDTIEWEDKYMIIACGGFNIKARGKVSFYNNTHPVSHQVHTSTDGKKKGYTILPRIGEFWALYRKWTPKLKCTDLEKMEYDIVQVVGETDLWIDISLMEMISGYSSVFKAKFDEGLNMTMRIPMKELLRFSHRIPAFKLIEACDNLRGCWELDPGAVPVQHARLHYLFCLLNELKACKVLNTCHSNK 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0480 977 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lal11g0480 977 Pfam DnaJ domain 67 128 IPR001623 -
Lal11g0480 977 Gene3D DnaJ domain 53 149 IPR036869 -
Lal11g0480 977 PANTHER - 1 951 - -
Lal11g0480 977 MobiDBLite consensus disorder prediction 687 717 - -
Lal11g0480 977 CDD DnaJ 67 120 IPR001623 -
Lal11g0480 977 MobiDBLite consensus disorder prediction 393 431 - -
Lal11g0480 977 MobiDBLite consensus disorder prediction 679 724 - -
Lal11g0480 977 MobiDBLite consensus disorder prediction 269 301 - -
Lal11g0480 977 MobiDBLite consensus disorder prediction 250 268 - -
Lal11g0480 977 Pfam Domain of unknown function (DUF3444) 726 931 IPR024593 -
Lal11g0480 977 Pfam Domain of unknown function (DUF3444) 438 642 IPR024593 -
Lal11g0480 977 SMART dnaj_3 66 123 IPR001623 -
Lal11g0480 977 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 951 - -
Lal11g0480 977 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal11g0480 977 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lal11g0480 977 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lal11g0480 977 MobiDBLite consensus disorder prediction 250 440 - -
Lal11g0480 977 SUPERFAMILY Chaperone J-domain 64 132 IPR036869 -
Lal11g0480 977 MobiDBLite consensus disorder prediction 328 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0480 Lal-Chr11 3734027 3737635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0480 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.242 4.74e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0480 - - lang:109334336 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1405 5 16688989 16692935 Lal11g0480 11 3734027 3737635 LSH
Lal7g1445 7 19317987 19321498 Lal11g0480 11 3734027 3737635 PCT
Lal11g0480 11 3734027 3737635 Lal7g1445 7 19317987 19321498 PCT