Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0477 ATGGAATTACGAAGGAGGAAGAGACGGGGAAGCTGTGTAGCAATGGCCTTCTTCGACGATTCCATCAACATTGTTCTACATGTCGATGCTTCCAATCTCCTGTTGTTTCATTTTTATTTTCTTCGTTCGACTTTGTCTTCCCCTTTCTGCAATGATGAGCACAAGCCAGAAAAGAAACAACAACTGAAAAAGGAGAACCATTCTGTAAGAGGGATAAGACCAAGAATTGGATTTTCTGATTCATTTTCAACCCTTGAGTTGGGAGGTTTAGATATTGAAGAGGGTCACCAATCTGAAAACTATTCAAGTCCTAGAAGTATAGAATCTGGAACACTTTCTTCAAGGGCAAGTACTTCTGATTCTGAGGGTCAACCAGATTTGAGAGGCACCAATAATAATCAGTGGCGTCAAGGTTTCTTTAAGTTGCTTAAGAAAGGTTCACAAATGCCATTTCATACATTTCATCCACTTAAGAATGTTCCAAAGCTAGCTAGGAGAAAGAGCAAAAGGATTAGAGAAGATTTGATTCCTTCTCTTACTTCTCCTTCTCTCAACTCATCTTTGGATACTGAGTTTTGTTGCTTTAAATCTTCTTGGAAAAATTTCACCCTCTCTGAGATTCAGGCTGCAACCAATGACTTTAGCCATGATAATTTGATTGGTGAGGGAGGCTATGCTGAAGTTTACTTAGGAAAATTGGAAGATGGAAACTTTGTTGCCTTTAAAAGGCTCACAAGAGGGAACCAAGAGGAAATGACAGCAGATTTTTTGTCTGAGTTGGGTATTATAGTGCATGTTGACCATCCAAATATTGCTAAATTGATTGGATATGGTGTTGAAGGTGGAATGTTTCTTGCTCTTCAGCTATCTCCACATGGCAGCTTATCTTCCATACTTTATGGACCTAGAGAGAAACTGAACTGGAGCCTAAGGTATAAGATTGCTATGGGTACTGCTGAGGGACTCCGCTATCTACATGAGGGATGTCAAAGAAGGATTATTCACAAAGATATCAAGGCTTCCAATATACTACTCTCACAGGATTTTGAGCCTCAGATATCTGATTTTGGACTTGCAAAGTGGTTGCCTGATCAATGGACTCACCATACTGTATCCAAAGTGGAAGGAACCTTTGGTTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAAACTGATGTGTATGCTTATGGTGTTCTATTATTGGAGCTCATTACTGGAAGACAAGCTTTGGATAGTTCACAGAAAAGTCTAGTGATGTGGGCCAAACCTTTGTTATCTGCAAACAACATGAAGGAACTTGTTGATCCGGTTTTGCCTGATGCTTATGATGAAGAGCAGATGAAACTAGTATTAAAGATACTAAGAGGTGAAGAAGAGAGCTTGAAGATGATAAAGGAACGCCAGAAATCAAAACTTCAAAGGACATATTCAGTAGAACTGAATGATGCAGAAGATTACAACTCAACCAAGTTTTTGAATGATAGGGATAGATACATGGAAACTATTCTAAGCACCCTTAACTCTATCAAAAAAGAAAGTAATGAAAGCTAG 1563 0.389 MELRRRKRRGSCVAMAFFDDSINIVLHVDASNLLLFHFYFLRSTLSSPFCNDEHKPEKKQQLKKENHSVRGIRPRIGFSDSFSTLELGGLDIEEGHQSENYSSPRSIESGTLSSRASTSDSEGQPDLRGTNNNQWRQGFFKLLKKGSQMPFHTFHPLKNVPKLARRKSKRIREDLIPSLTSPSLNSSLDTEFCCFKSSWKNFTLSEIQAATNDFSHDNLIGEGGYAEVYLGKLEDGNFVAFKRLTRGNQEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMFLALQLSPHGSLSSILYGPREKLNWSLRYKIAMGTAEGLRYLHEGCQRRIIHKDIKASNILLSQDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSANNMKELVDPVLPDAYDEEQMKLVLKILRGEEESLKMIKERQKSKLQRTYSVELNDAEDYNSTKFLNDRDRYMETILSTLNSIKKESNES 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0477 520 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
Lal11g0477 520 Pfam Protein kinase domain 216 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0477 520 MobiDBLite consensus disorder prediction 50 70 - -
Lal11g0477 520 PANTHER OS08G0249100 PROTEIN 69 496 - -
Lal11g0477 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Lal11g0477 520 Gene3D Phosphorylase Kinase; domain 1 178 286 - -
Lal11g0477 520 SMART serkin_6 214 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0477 520 SUPERFAMILY Protein kinase-like (PK-like) 199 459 IPR011009 -
Lal11g0477 520 Gene3D Transferase(Phosphotransferase) domain 1 291 489 - -
Lal11g0477 520 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 69 496 - -
Lal11g0477 520 ProSiteProfiles Protein kinase domain profile. 214 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0477 520 MobiDBLite consensus disorder prediction 96 132 - -
Lal11g0477 520 MobiDBLite consensus disorder prediction 94 132 - -
Lal11g0477 520 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0477 Lal-Chr11 3700474 3712176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0477 186 457 Receptor kinase-like Gene Family AT1G53420 40.714 1.30e-62 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal11g0477 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0477 - - gmx:100776081 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1413 5 16752716 16759726 Lal11g0477 11 3700474 3712176 LSH
Lal3g0328 3 2130989 2133446 Lal11g0477 11 3700474 3712176 LSH