Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0474 ATGATAGTGAAGGAGAATCCTGTAGGTACTGAACTGGCGATCAGTAATGGCAACGTGGAGGAGGAAATAGATTTTTCCTGTGGGCCGTACATCGGTTTGGAGTTTGATTCGTCAGATGATGCACTTAAGTTTTACACATCATATGCAAATCGAACAGGATTTAAAGTTAGGATCGGTCAGCTGTATCGGTCAAGAACTGATGGGTCAGTTTCTTCTCGAAGGTTCGTGTGCTCGAAAGAAGGATCTCAGCTCAGTTCAAGAACAGGTTGTCCAGCATTCATAAGGGTACAGTTAAATGCTTCGGAAAAGTGGGTCGTTGATCATTTCCACAAGGACCACAATCACAATCTTGATACTGGAAGTGAAAATTGCATGCCAACATCACATCAGAGGGATGCTACAGCTATCAGTTCTTTTATTGAAGTGCTCCGTAGGCCAAAGAAGAAATTGATTGCAAAATCCAATGAACCTTCTCCTCCCTTTGGAATTATTGATTTCAAGCGTCTGAGAAAGGAAGAATTGGAAGGACCGTCCACAACTGAACCATATGTAGGTCAAGAATTCAGTTCGCCTAATGAAGCCTACCAATTTTATCATACATATGCAGCATATGTGGGTTTTGGAATTCGAATTGGTCAATTGTTTCGTTCTAAGAATGATGGGTTGATCACATCCCGCCGATTTGTGTGCTCAAAAGAGGGGTTCCAACACCCTTCAAGAGTAGGTTGTGGAGCTTATTTGAGGATTAAAAGACAACCGTCAGGAAAGTGGATAGTGGACCGTCTCCGAAAAGATCATAATCATGACATGGACTCTGAAAAGGACAGTAAGGCAAATAGTTTTCCTGCTCCTAACATTTTGACTGAGGAGGTACATGCTGGATCAGCAGATGGTCACTTGTTTAAGATAGATAACTACTCTGTCACTAGAGGAGTTAGACAAAATCACATCAAAAGTGATTGGTTTAGTGTGTTCTTAGAGTATTTCCAATCAAGACAAGCAGAAGATACAGGATTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGCGATGTCCTTGTTCTTGACACATCATACCGAAAAAGTGTCTATTTAGCACCATTTGCTACTTTCGTTGGAGTTAACCATCATAAGCAACCTGTGCTTCTTGGTTGTGCTCTAATTGCTGATGAATCCGAAGAATCTTTCACTTGGTTGTTTCAAACATGGCTGAGGGCAGCATCTGGCCGGCAGCCGTTGTCAGTAATAGCTGATCAAGACATTGCAATCCAGAGAGCAATAGCAAAAGTCTTTCCAGGAACCTCTCATCGCTTTTCATTATGGCAAATTAAGGCAAAGGAACAAGAGAATGAGAGTCTTTTCGGTGAAGAATTTACAACAGATTATGAAAAATGTGTTTACCAAAGTCGGACAGTTGAAGAATTTGACACAAGATGGAATGCCCTACTCAACAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCGTCCTGGGTTCCATTATATTTAAAGGGCATTTTTTTTGCGGGCATACCCATGAATGAAAGCGTCGAATCATTTTTTGGTGCACTTTTGAATGCCCAAACACCTCTCATGGAGTTCATTCCAAGGTATGAAAGAGGTCTTGAGCAACGCCGTGAGGACGAAAGAAAAGAGGATTTTAATACTTCTAATTTTCATCCTTTTTTGCAAACAAAAGAACCAGTAGAAGATCAATGTAGTAGGCTTTACACACTTACCTTATTCAAAGTATTTCATAAAGAGCTTTTGCAGTGCTATAGCTATCTTGGGTTTAAAATTTATGAAGAAGGGCCCCTCAGCAGATACTTGGTGCGCAAGGGCGGAAATGATACGGAGAAGCATATGGTTACATTTAATGCATCCAATCTCATCATTAGCTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGCTTTGAGGGTTTTGCAGATACTGGAGTTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGTTGGACAAGAAACGCCGAGGATGGTGCTTTTCCTGATACAGAGTCATGGAGTAGTTCTCAAGAAGCCAGGAACTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATATGTAGATGCTGGTGCATCATCTATTGAAAAGTATAAACTTGCCTATGATATTTTGAGGGAGGGTGGTAGAAAGCTATGTTGGCACAGGTGA 2280 0.4079 MIVKENPVGTELAISNGNVEEEIDFSCGPYIGLEFDSSDDALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGSQLSSRTGCPAFIRVQLNASEKWVVDHFHKDHNHNLDTGSENCMPTSHQRDATAISSFIEVLRRPKKKLIAKSNEPSPPFGIIDFKRLRKEELEGPSTTEPYVGQEFSSPNEAYQFYHTYAAYVGFGIRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWIVDRLRKDHNHDMDSEKDSKANSFPAPNILTEEVHAGSADGHLFKIDNYSVTRGVRQNHIKSDWFSVFLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVLDTSYRKSVYLAPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAASGRQPLSVIADQDIAIQRAIAKVFPGTSHRFSLWQIKAKEQENESLFGEEFTTDYEKCVYQSRTVEEFDTRWNALLNKYGLKDNAWLKEMYEKRASWVPLYLKGIFFAGIPMNESVESFFGALLNAQTPLMEFIPRYERGLEQRREDERKEDFNTSNFHPFLQTKEPVEDQCSRLYTLTLFKVFHKELLQCYSYLGFKIYEEGPLSRYLVRKGGNDTEKHMVTFNASNLIISCSCQMFEYEGVLCRHALRVLQILELREVPSRYILHRWTRNAEDGAFPDTESWSSSQEARNLMLWSLRETASKYVDAGASSIEKYKLAYDILREGGRKLCWHR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0474 759 Pfam FAR1 DNA-binding domain 196 270 IPR004330 -
Lal11g0474 759 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Lal11g0474 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 26 122 - -
Lal11g0474 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 145 755 - -
Lal11g0474 759 SMART 26again6 656 683 IPR006564 GO:0008270
Lal11g0474 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 122 IPR031052 GO:0006355
Lal11g0474 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 145 755 IPR031052 GO:0006355
Lal11g0474 759 Pfam MULE transposase domain 370 463 IPR018289 -
Lal11g0474 759 Pfam SWIM zinc finger 640 678 IPR007527 GO:0008270
Lal11g0474 759 ProSiteProfiles Zinc finger SWIM-type profile. 645 681 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0474 Lal-Chr11 3675550 3677829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0474 MULE 2.4e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0474 - - lang:109345299 1386.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0317 3 2051102 2053384 Lal11g0474 11 3675550 3677829 LSH