Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0462 ATGATGATGACACTATCAGCCTCCTCAACATGCAAACAAGTGCAACCTTTGGTAAATTTTGAAAAGGGACTAAGCAAAATGGATTCATTATTCAACCATAGGAAGAAGGATAGGGTGGTAGTAATATTGGGGGCTACTGGCACAGGCAAGACAAAGCTAGCCATAGACCTAGCCCAACATTTTCCACCAGCTGAAATAGTTAACTCAGACAAAATGCAAGTGTATAAGGGCCTTGATATCACTACCAATAAGGTTACTAAAGAAGAGTGCCATGGTGTTACACATCACCTTCTAGGAATGGTTGATCCTAACTCAAATTTCACTGCCAATGATTTTTGTCATCATGCCACTTTAGCCATTGGTTCCATCATAGGGAGGGATGGTTTGCCCATCATTGCTGGTGGGTCCAACTCATATATTGATGCTTTGGTTAATCACCACACAGATTTTAGGTTAAATTATGAGTGTTGCTTTCTGTGGGTGGATGTGTCACTCCCAGTGCTCCATTCTTCCCTCAACGCACGTGTGGATCGAATGATTGAAGCTGGACAAGTTGATGAAGTTCGTGAATTCTTTGACCCTTATGCTGATTACACCAAAGGGATTCGAAGGGCCATTGGGGTACCTGAGTTTGATGAGTTTCTAAGAACAGAAGCCACAACCGATGAAAAAACCAAGAACAAGATTCTAGACACTGCAATTTCTAGAATCAAAGTCAATAATTGCACTCTTGCCAATCTTCAGGTTCAGAAGATTCAACGCCTTTATACTTTGTGGAGAAGGAACATGCATCGCCTTGATGCCACTGAAGTGTTTCTCAAGAAAGGGTGTGAAGAAATGTGGGAGGAACACGTGCTAGCAAAGAGCTTACGGGTCTTGCACAAGTTCCTATACCCGGAAAAAAACCGTGTTTCTCTCGCAGAAAATGATATATTCTCCTACAAATCATCCTACAGAAACGTAACATGCGTCATAAAATGA 981 0.4179 MMMTLSASSTCKQVQPLVNFEKGLSKMDSLFNHRKKDRVVVILGATGTGKTKLAIDLAQHFPPAEIVNSDKMQVYKGLDITTNKVTKEECHGVTHHLLGMVDPNSNFTANDFCHHATLAIGSIIGRDGLPIIAGGSNSYIDALVNHHTDFRLNYECCFLWVDVSLPVLHSSLNARVDRMIEAGQVDEVREFFDPYADYTKGIRRAIGVPEFDEFLRTEATTDEKTKNKILDTAISRIKVNNCTLANLQVQKIQRLYTLWRRNMHRLDATEVFLKKGCEEMWEEHVLAKSLRVLHKFLYPEKNRVSLAENDIFSYKSSYRNVTCVIK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0462 326 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 304 IPR039657 -
Lal11g0462 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 151 IPR027417 -
Lal11g0462 326 Gene3D - 36 297 IPR027417 -
Lal11g0462 326 ProSiteProfiles Guanylate kinase-like domain profile. 37 125 IPR008144 -
Lal11g0462 326 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 29 304 - -
Lal11g0462 326 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 165 263 - -
Lal11g0462 326 Pfam IPP transferase 152 250 - -
Lal11g0462 326 Pfam IPP transferase 73 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0462 Lal-Chr11 3563215 3565763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0462 154 300 C2H2 Transcription Factor Family AT2G27760 32.184 1.11e-20 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1971 14 18769809 18771950 Lal11g0462 11 3563215 3565763 PCT
Lal19g1524 19 17536270 17539934 Lal11g0462 11 3563215 3565763 PCT
Lal11g0462 11 3563215 3565763 Lal14g1971 14 18769809 18771950 PCT
Lal11g0462 11 3563215 3565763 Lal19g1524 19 17536270 17539934 PCT