Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0456 ATGTCTCACATAGCTGTCGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGGTCCTTAACACCATCTTTCTATATTAAAAGGGGAGATCAAGCTTCTATCATAGGGGGAGTGATAGAATTCATCAAGGAGTTACACCAAGTTCATCAAGCATTGGAGTCACAGAAAAGAAGAAAGAGTCTAAGCCCTAGCCCTGGACCAAGTCCAAAAACATTGCAGCCATCAATTCATCAACTTGATAACTACTCTGGAATTGGGAGTGATAATTCTTTTAAGGAACTAGGAGCAAGTTGCAACTCATCAGTTGCTGATGTAGAAGTGAAAATCTCTGGTTCAAATGTTATTATGAAAGTGATTTCTCACAGAATTCTGGGTCAAGTTGCAAAGATTATAAGTGTTTTGGAAAGTCATTCATTTGAAGTCCTTCATCTGAACATCAGTAGCATGGAGGACACAGTCTTATACCACTTTGTTGTTAAGATAGGGCTGGAATGTCAACTAAGTCTGGAGGAACTAGCAATGAAAGTGCAACAAAGCTTCACCTCTGAGGCAATTACTGCTCTATGA 579 0.3921 MSHIAVERNRRRQMNEHLKVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVHQALESQKRRKSLSPSPGPSPKTLQPSIHQLDNYSGIGSDNSFKELGASCNSSVADVEVKISGSNVIMKVISHRILGQVAKIISVLESHSFEVLHLNISSMEDTVLYHFVVKIGLECQLSLEELAMKVQQSFTSEAITAL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0456 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 190 IPR044283 GO:0003700|GO:0010052
Lal11g0456 192 SMART finulus 4 55 IPR011598 GO:0046983
Lal11g0456 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Lal11g0456 192 MobiDBLite consensus disorder prediction 61 79 - -
Lal11g0456 192 Gene3D - 1 64 IPR036638 GO:0046983
Lal11g0456 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Lal11g0456 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
Lal11g0456 192 MobiDBLite consensus disorder prediction 57 79 - -
Lal11g0456 192 PANTHER TRANSCRIPTION FACTOR MUTE 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0456 Lal-Chr11 3503728 3506369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0456 1 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.000 9.38e-86 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal11g0456 HLH 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0456 - - gmx:100810771 305.834