Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0434 ATGAATGCTGAAACTAAGAACTCTCTCAAAGAGAAACCAACACAAACCATGTCATCTTCGTCTTCTTCTCCATCTTTTAGCAGTGCTTTTGGAAACTCTTCAAACCCACCCCAAGTGAAACGTAGAGGAAGGCCTCTTGGTTCATATAAGAAGTTTCCTGAGTTTACAGCTCCAATGGTTAGGGCTTATTATCGATCAAAAATGCCTCGGTTTCGTTGGACCCCAGAACTTCACCACTGTTTCCTTCATGCAGTTCAAACTCTTGGAGGAATAGAAAGGGCCAAACCAAAGATGATTTTAGACCTGATGAATGTGGCGGAGATTACTGTATCTCATGTTAAAAGCCACCTTCAGCATTACAGGACCATGAAGCAGGAGCTGCACATTAATGAAGAATACCCAGCTCCCACTTTTACAGGAATTCCCAGCGATGGCCAGCAGCATATTCAGCAGTTAAGTTGTGAATCTGATCATTTTGTTGAAGAGCTTGCTCGTATCCAAGCTCAATGGAGACCAATTTTAACTAATGGCGAAGAAAATAAGACTCCAAACTACATTATCTTTAAGGATATTCTCGGAAGCCAGAGCTCCCAAGAGAATCAGAATCCTCCTGAAATGGAGGCAGTAGGTGCTGCTATTCCTGAGAGGGACGATGAAGACATGTTGTCCCTATCATTAGGCTTAAGTGGCCTTAATAATCAGAACCCAAATTCAGTTGCAAATGATATCTCTCTTGAGCTCAAGCTCAATTAA 753 0.421 MNAETKNSLKEKPTQTMSSSSSSPSFSSAFGNSSNPPQVKRRGRPLGSYKKFPEFTAPMVRAYYRSKMPRFRWTPELHHCFLHAVQTLGGIERAKPKMILDLMNVAEITVSHVKSHLQHYRTMKQELHINEEYPAPTFTGIPSDGQQHIQQLSCESDHFVEELARIQAQWRPILTNGEENKTPNYIIFKDILGSQSSQENQNPPEMEAVGAAIPERDDEDMLSLSLGLSGLNNQNPNSVANDISLELKLN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0434 250 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 11 194 - -
Lal11g0434 250 Gene3D - 68 125 - -
Lal11g0434 250 SUPERFAMILY Homeodomain-like 67 125 IPR009057 -
Lal11g0434 250 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 69 123 IPR006447 GO:0003677
Lal11g0434 250 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 194 IPR044848 GO:0003700
Lal11g0434 250 MobiDBLite consensus disorder prediction 1 39 - -
Lal11g0434 250 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0434 Lal-Chr11 3254112 3257993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0434 60 126 G2-like Transcription Factor Family AT2G42660 58.209 4.41e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal11g0434 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0434 - - lang:109334099 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1463 5 17130554 17134648 Lal11g0434 11 3254112 3257993 LSH