Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0428 ATGGACAAAGAATTGGGTCTTACCCTTGGCACTTGTTCTTCGTCTCTTTCACTCCCATTTTTTAGTCCCAAACAACCACAACCACCTTTGAAAACTTCCTCCAAAGATACTATGGAAGAAGAAGAAGAAGGTGATCTAAACCGTATAGTTGTTGGTGAAGTTGACTTCTTCTCTGATAGGAACAAGTCATCAACTCCAGTAGTTGAACATGACCATGATCATATTCATCAACATGTTAAACCCAAAATCAAGAAGGAGTTGGTTTCTATTGAAACAAAACCACACACCCCTAATCTGCATGTTTATACTGGTTTACAACTCCTTACTGCTAACACTGTGGATGATGGGGTTCCATCAGATGTTGAAAATAAACGAGTTGCAAGGACAATTGAGCTTTCACAGTTGCAAGTGGAGCTTCAACACATGAATTCAGAGAACCAGAAGCTGAAAGAAATGCTCAACCATGTTAGCTTTAACTACAAGGCTTTGCAAATGCATCTAGTGACATTAATGCAACAACAAGAGAGCACAGAAAATAATGTTGTTCAAGGAAAAGCTTACGAGGAGAAGAAACATGGTGTAGTAGGAGGAATGGTACAAAAACAGTTCCTAGACTTAGGTCCTAGTGGTACATTAGAAGTAGATGATCAAGTATCGAATTCTTCTTCTGATGAAAGAAGACAATGTAACACACCTCAGAAAGATAAAATTGAAGCTACTACAAGGGATTACGTGAGAAATGCTAATGGTAAGAACGAGTTAGGTAGAGAAGAGAGTTCAAACTCAGAATCACAAGGTTGGGGTCTCAATAATAAGGTTCAGAAAATGAGCCCTCTTAGAATTATGGATCAGTCCAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCCCGGTCAGAAGCTCCTATGATCACTGATGGGTGTCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAACCCATGTCCTAGAGGATATTTCAAATGCACCATGAAAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAAGATAGAACTATTTTGATAACAACATATGAAGGAACACATAATCATCCACTACCACCAGCTGCAATGGCCATGGCATCAACAACTTCAGCTGCTGCTAAAATGTTACTATCAGGATCAATGACTAGTTCAGATGGGATAATACTGAGACCAAATTTGTTATCTAGAGCTATTATTCCTTGTTCTTCTAGCATGGCAACATTTTCTGCTTCAACACCATTCCCTACTGTAACATTAGATCTCACAAACAACGTTAACAACCCAGACCTATTGCAATTCCAAAGAGCTATTCATAATCCTTCCCCTATTTCCCAAGTACCCTTCTTTGAAGGGCAGCATCCTCAGAACTTTAGGGCGCCTACCCCATTTGCACAAGGACTCTATAACCAATCCAAATTCTCTGGTCTTCAATTCTCTCAAGATCAAATTGGGTGTTCCCAATTGCCTCCACAAGCTCCAAGACCATGTTTCACGGCTGAGACAGTCAGTGCTGCCACCGCTGTCATCACCGCCGACCCTAATTTCACGGCTGTGCTTGCCGCCGCTATCTCCTCAATCATGGGTGGTGCCCATGCAAACAACAATGGCTACAACAACGATGACAACAACAATCACAATATCAACAATAGAACTAGTACACTTAGCAGTTTTTCAGGAAACTAA 1710 0.4088 MDKELGLTLGTCSSSLSLPFFSPKQPQPPLKTSSKDTMEEEEEGDLNRIVVGEVDFFSDRNKSSTPVVEHDHDHIHQHVKPKIKKELVSIETKPHTPNLHVYTGLQLLTANTVDDGVPSDVENKRVARTIELSQLQVELQHMNSENQKLKEMLNHVSFNYKALQMHLVTLMQQQESTENNVVQGKAYEEKKHGVVGGMVQKQFLDLGPSGTLEVDDQVSNSSSDERRQCNTPQKDKIEATTRDYVRNANGKNELGREESSNSESQGWGLNNKVQKMSPLRIMDQSNTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRGYFKCTMKVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTSAAAKMLLSGSMTSSDGIILRPNLLSRAIIPCSSSMATFSASTPFPTVTLDLTNNVNNPDLLQFQRAIHNPSPISQVPFFEGQHPQNFRAPTPFAQGLYNQSKFSGLQFSQDQIGCSQLPPQAPRPCFTAETVSAATAVITADPNFTAVLAAAISSIMGGAHANNNGYNNDDNNNHNINNRTSTLSSFSGN 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0428 569 MobiDBLite consensus disorder prediction 259 274 - -
Lal11g0428 569 MobiDBLite consensus disorder prediction 209 274 - -
Lal11g0428 569 ProSiteProfiles WRKY domain profile. 302 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal11g0428 569 Pfam WRKY DNA -binding domain 309 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal11g0428 569 SMART WRKY_cls 307 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal11g0428 569 PANTHER WRKY TRANSCRIPTION FACTOR 6 36 549 - -
Lal11g0428 569 Coils Coil 132 152 - -
Lal11g0428 569 MobiDBLite consensus disorder prediction 228 242 - -
Lal11g0428 569 Gene3D WRKY domain 292 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal11g0428 569 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 36 549 IPR044810 GO:0003700
Lal11g0428 569 MobiDBLite consensus disorder prediction 213 227 - -
Lal11g0428 569 MobiDBLite consensus disorder prediction 1 44 - -
Lal11g0428 569 SUPERFAMILY WRKY DNA-binding domain 300 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal11g0428 569 MobiDBLite consensus disorder prediction 8 33 - -
Lal11g0428 569 MobiDBLite consensus disorder prediction 546 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0428 Lal-Chr11 3203910 3207024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0428 44 548 WRKY Transcription Factor Family AT1G62300 49.615 1.00e-129 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal11g0428 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0428 - - gmx:100802124 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0428 11 3203910 3207024 Lal11g0428 11 3203910 3207024 ECH
Lal6g0068 6 405122 408042 Lal11g0428 11 3203910 3207024 ECH
Lal1g0502 1 3222229 3227534 Lal11g0428 11 3203910 3207024 ECH
Lal5g1472 5 17177574 17180501 Lal11g0428 11 3203910 3207024 LSH