Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0417 ATGCCTCTTATCATCTTTTCTTTCTCTAACTTCATCTCACTCTCTTTCATCCTCTCACTTTTTCTTCTACCTCTTTCACTCTCTACCACTGACCCTTATGATGTTGATGCTCTTCAAGTTTTGTACAATGCTTTAAATAGTCCAAATGTGCTAACGGGTTGGAAAATCGGTAACAGTGATCCATGTGGAGAGTCATGGAAAGGGATAACCTGTGAGGATTCTTCAGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCAATGGGACTCTTGGATACTTGCTTTCAGACCTTATGTCACTGAGAAAGCTTGATTTAAGCGACAACAAGATCCATGACACAATTCCCTACCAGCTGCCACCGAATCTTACAAGCATGAACCTTGCAAGAAATAAATTAAGTGGAAATCTTCCTTATTCATTTTCAGCTATGACTTCTCTCAATTATCTGAATGTAAGCAATAATGTGCTCTCCATGACAATTGGTGACATTTTTCAAACTCTTTCTGATCTTGGTACCATGGATCTATCATTCAATAACTTTTATGGAGATCTTCCTCTTTCATTTGCTTCATTGTCCAATATTTCTTCTCTCTTTTTGCAGAACAATCGGTTGAGTGGATCTCTTGTTGCTCTTGTTGGTTTGCCGTTGGATACTCTAAATGTTGCTCACAATAATTTCAGTGGATGGATACCTCATGAGCTTAGTTCCATCGGTAATTTCATATATGATGGAAACTCTTTTGCTGATGGTCCTGCTCCTCCTTCACCGCCATTTACATCACCTCCGCCGAGTGGATCTCATAGTAATCATCATCGTTCCGAATCTGGTTCACATGATAAAGCATGGAGTTTTAATGATGAAAAATCTGATAGCCATAAGGGTTTGGCAACGGGGGCCACTGTAAGCATTGTTTTAGGTTCAGTGTTGGTGGCTGTTCTTGTGCTACTCGCTCTTGTTTTCTGTATCCGGAAGCAAAAAAAGAAGGAAAATGGTGCAAGAACTTCTAATGGGAGCCTTCCTCGTGGAATTATGAATGTAATTCCTCAGGTACAAGAGCAAAGGGTAAAAAGTACTGCTGTTGTTGCAGATCTCAAGCCTCCTCCTGCAGAAAATGTGATGATCGGGAGGGTACCTATAAAGAACGGATCTGTAAGGCAAATGAAGTCCCCGATAACTTCCACAGCATACACAGTTGCTTCTCTCCAAAGCGCAACAAATAGCTTTTGTCAGGAGTTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCACAAATGGAAAGGTCATGGCTATTAAGAAGATTGACAAGTCGGCACTGTCACTACAAGAGGAAGACAATTTTCTTGAAGCTATTTCAAATATGTCACGCTTGCGGCACCCAAACATTGTTACATTGTCTGGATATTGTGCTGAGCATGGCCAACGACTTCTAGTTTATGAGTACATCGGAAATGGGAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGATTTATCGTGGAATGCCCGTGTACGCATAGCACTCGGCACAGCCCGAGCTTTAGAGTATTTGCACGAAGTTTGCTTGCCTTCTATTGTTCATAGAAATTTCAAATCAGCAAATATATTACTTGATGATGAGCTCAATCCGCACCTGTCTGACTGTGGTTTAGCTCCTCTAACACCAAACACCGAGCGGCAGGTTTCAACTCAGATGATCGGTTCATTTGGTTATAGCGCTCCCGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGCGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTATTGACGAGTCGAAAACCACTTGACAGTTCACGGGCGAGATCAGAGCAATCCCTTGTGCGGTGGGCTACGCCGCAGCTCCATGATATAGATGCTTTGGCGAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCAAAGTCATTGTCGCGCTTTGCCGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCATTGGTAAGACTAGTCCAAAGAGCAAGCATGGTTAAACGGCGACCGAGTGAGGAATCTGGTTTTGGTCACAAGACCCCGGATCATGAGTCCATAGACATGTCCTTTTAA 2151 0.4268 MPLIIFSFSNFISLSFILSLFLLPLSLSTTDPYDVDALQVLYNALNSPNVLTGWKIGNSDPCGESWKGITCEDSSVVSIELSGLGLNGTLGYLLSDLMSLRKLDLSDNKIHDTIPYQLPPNLTSMNLARNKLSGNLPYSFSAMTSLNYLNVSNNVLSMTIGDIFQTLSDLGTMDLSFNNFYGDLPLSFASLSNISSLFLQNNRLSGSLVALVGLPLDTLNVAHNNFSGWIPHELSSIGNFIYDGNSFADGPAPPSPPFTSPPPSGSHSNHHRSESGSHDKAWSFNDEKSDSHKGLATGATVSIVLGSVLVAVLVLLALVFCIRKQKKKENGARTSNGSLPRGIMNVIPQVQEQRVKSTAVVADLKPPPAENVMIGRVPIKNGSVRQMKSPITSTAYTVASLQSATNSFCQEFIIGEGSLGRVYKADFTNGKVMAIKKIDKSALSLQEEDNFLEAISNMSRLRHPNIVTLSGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKDLSWNARVRIALGTARALEYLHEVCLPSIVHRNFKSANILLDDELNPHLSDCGLAPLTPNTERQVSTQMIGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTSRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASMVKRRPSEESGFGHKTPDHESIDMSF 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0417 716 PANTHER OS01G0253100 PROTEIN 28 712 IPR045271 GO:0004714|GO:0006468
Lal11g0417 716 Pfam Leucine rich repeat 99 156 IPR001611 GO:0005515
Lal11g0417 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 28 712 - -
Lal11g0417 716 MobiDBLite consensus disorder prediction 251 289 - -
Lal11g0417 716 SUPERFAMILY L domain-like 30 237 - -
Lal11g0417 716 Gene3D Ribonuclease Inhibitor 31 258 IPR032675 -
Lal11g0417 716 CDD STKc_IRAK 414 685 - -
Lal11g0417 716 MobiDBLite consensus disorder prediction 695 716 - -
Lal11g0417 716 Gene3D Transferase(Phosphotransferase) domain 1 486 704 - -
Lal11g0417 716 ProSiteProfiles Leucine-rich repeat profile. 99 120 IPR001611 GO:0005515
Lal11g0417 716 Gene3D Phosphorylase Kinase; domain 1 377 485 - -
Lal11g0417 716 Pfam Protein kinase domain 413 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0417 716 SUPERFAMILY Protein kinase-like (PK-like) 386 682 IPR011009 -
Lal11g0417 716 ProSiteProfiles Protein kinase domain profile. 408 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0417 716 MobiDBLite consensus disorder prediction 271 289 - -
Lal11g0417 716 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0417 Lal-Chr11 3128563 3134795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0417 143 716 Strubbelig Receptor Gene Family AT4G22130 68.977 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal11g0417 Pkinase 8.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0417 - - gmx:100781455 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0269 3 1770173 1775977 Lal11g0417 11 3128563 3134795 LSH