LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal11g0401	ATGAAGCCTACATTCATAGTCAATGAATCTAAGAGAAAGGTAACATACAAAGTAAGGAAAATTGGTACGAAGAAGAAGCTTCATGAGATAAGCACATTATGCGGAATCCAAACATGTGCTATCATATATGGTCCAAATGAAACTAAAACTAAGCTTTGGCCATCTCAATCGGAGGTTCAAAGGGTGATCAACAAGTTCAATGGAATGTCTGAGATTGATCAAAGGAAAAATATGTCCACTCAAGAAAGCTTTTTGAAGAAAAACTTCGAGAAGGTCCGAGATCAATTGAAGAAAGCACGAGATGAGAACAAGAAGAACGAAATTGAGCTTTTCATGTTCCAATGCTTGGGTGTCGGAAGCATTATTAACAAAGGTGACACTATTGATATGAATTATTTATTGAAGGTGATAAACCTTAATCTGAGATATGTTTATGGGAAAAAGAGTGGGGATCAACCGCAACATGGGATAGGAGTGGCTGCAAATGGAATATAA	495	0.3677	MKPTFIVNESKRKVTYKVRKIGTKKKLHEISTLCGIQTCAIIYGPNETKTKLWPSQSEVQRVINKFNGMSEIDQRKNMSTQESFLKKNFEKVRDQLKKARDENKKNEIELFMFQCLGVGSIINKGDTIDMNYLLKVINLNLRYVYGKKSGDQPQHGIGVAANGI	164

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lal11g0401	164	ProSiteProfiles	MADS-box domain profile.	1	46	IPR002100	GO:0003677\|GO:0046983
Lal11g0401	164	Coils	Coil	82	109	-	-
Lal11g0401	164	PANTHER	MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN	4	151	-	-
Lal11g0401	164	SMART	madsneu2	1	55	IPR002100	GO:0003677\|GO:0046983
Lal11g0401	164	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	5	47	IPR002100	GO:0003677\|GO:0046983
Lal11g0401	164	SUPERFAMILY	SRF-like	4	89	IPR036879	GO:0003677\|GO:0046983
Lal11g0401	164	Gene3D	-	8	91	IPR036879	GO:0003677\|GO:0046983
Lal11g0401	164	PANTHER	MADS BOX PROTEIN	4	151	-	-
Lal11g0401	164	CDD	MADS_SRF_like	5	79	IPR033897	GO:0000981\|GO:0000987\|GO:0045944

Showing 1 to 9 of 9 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal11g0401	Lal-Chr11	3002183	3002677	Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal11g0401	1	162	Type I MADS-box Gene Family	AT5G48670	40.000	6.25e-32	114

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Lal11g0401		SRF-TF	2.4e-11	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal11g0401	-		-	lang:109344582	185.652

Showing 1 to 1 of 1 entries