Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0394 ATGACCACAAGTTCTATTTGTATGAGATGTCAGGGAGGTGTTGAAGATCTTATGCATATATTTAGAGACTCGCGTGTGGTGGGAATTTCTTATGCATATATTCATATTATAACACAGAGAACCAAACCCAATGGGAATTTCTTCTTGGCTGGCGTGTGGTGGGCTTGGAGATGGAGAAACAATATCATTTTTGGCGATTGTCCTTGGGATATTGATTTGGTTGCTCGTCATGTTCACCATGATTTTGGTGAGTGGCGTCATTTGGGGAAGAATGATGACATAGAGTTTATCACACCCTTAGTTCATTGGTGTTGCCCTAGGGTTGGTGTGATTAAACTTAAGGTTGACGGTAGTTGTATCACTGGCTCTAACATAATGAGCGGTGGCTTTCGGGGTTCTCTGCAAAATTTGGACAAGGAAGTCATTCTGGAAAGTGACTGTCTTGAAGCTGTGCATCTCGTCTCTGAGGGAGTTTGCATTCGCAGAAGGCATATTAAGCGTGTTGTCTCTAATGTGTGCAGTTGGATGTCTCGTGACTGGATCGTAGAGATTAAGTTTGTTGTTAGAGAAGCTAACAAAGCTGCATATTTCATGGCGAAGCTAGGGACTATTCATCCATCACCGCCAATCATAACCGACCACCTCTCTTTCCTTCCCGCCGCCATCCTCACCCTCGCGGCTGCGCTCTCACCAGATGACAGGGAAGTCTTGGCGTACCTCATCTCTTGCTCTTCCAACAACAACTTTTCTGGCAACTCACGCCGGAGCACCACCTCCAACAAAAACAGCAACGCCGCCGTCTCCTCCGGGGATCATGCTCCGTTGTTCAACTGCAGTTGCTTCTGTTGCTATACCAATTACTGGGTGAGGTGGGACTCTTCACCGAATCGACAACTCATACACGAGATCATCGATGCTTTCGAGGATTGGTTGGTGCAACAGAAAACTAGCAATAACATCAAGGGTGGTAAGAATGGAAAGAAAGAAAAGAGGAACAACAAGAAAGGGTTGAATAATAAGAAACAGACCGAGTTGAACCGGGTTGATTTGGTGAGTGATGTATCAAGTGAGTTGGAATCGGTGGAAGAAAGTAACGATAGTGAAAGTGGTAATAAGATTGAAGATGAAGAAAAAGGATCAGTGAGAAGGTTTGTTAGTTTCATTGGAGAAAGGATTTGGGGTGGTTGGGGACAATGA 1197 0.4478 MTTSSICMRCQGGVEDLMHIFRDSRVVGISYAYIHIITQRTKPNGNFFLAGVWWAWRWRNNIIFGDCPWDIDLVARHVHHDFGEWRHLGKNDDIEFITPLVHWCCPRVGVIKLKVDGSCITGSNIMSGGFRGSLQNLDKEVILESDCLEAVHLVSEGVCIRRRHIKRVVSNVCSWMSRDWIVEIKFVVREANKAAYFMAKLGTIHPSPPIITDHLSFLPAAILTLAAALSPDDREVLAYLISCSSNNNFSGNSRRSTTSNKNSNAAVSSGDHAPLFNCSCFCCYTNYWVRWDSSPNRQLIHEIIDAFEDWLVQQKTSNNIKGGKNGKKEKRNNKKGLNNKKQTELNRVDLVSDVSSELESVEESNDSESGNKIEDEEKGSVRRFVSFIGERIWGGWGQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0394 398 Coils Coil 327 347 - -
Lal11g0394 398 PANTHER F12F1.11-RELATED 199 397 - -
Lal11g0394 398 CDD RNase_H_like 139 200 IPR044730 -
Lal11g0394 398 PANTHER F12F1.11-RELATED 199 397 - -
Lal11g0394 398 Pfam Reverse transcriptase-like 139 200 IPR002156 GO:0003676|GO:0004523
Lal11g0394 398 MobiDBLite consensus disorder prediction 354 375 - -
Lal11g0394 398 MobiDBLite consensus disorder prediction 318 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0394 Lal-Chr11 2906846 2908730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0394 - - gmx:100810699 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1508 5 17588070 17593224 Lal11g0394 11 2906846 2908730 LSH
Lal3g0251 3 1639588 1642186 Lal11g0394 11 2906846 2908730 LSH