Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0376 ATGCAAACATCTCGGAAACACACTACTTCACCCGGGATCAATTTATACCACCAGCCTGTGCAAGGCATTGATCCCAACACAAGTTGCCAAATACTACAAAGCAATTCAAGCCATGATGTCGACGGTAGCAGCAGCCAAGGAACCATTGTTTCTTTTGAAACCTTAAAGGAACAGTACTTTACCCTGGAATCATCACCAGCAACTATTGGTCTCATAGGTTGCGATTCTCCTTCCTATGCTAGTGTTTCATCCAATAGGAGTCCCTTTTCTCCACAAGGTTCTCAATCATACAATTCAGATCAGCACCAGTCATCTAACAACACCTATGGATCACCGGTAAGTGTGTACTCTAGTGCCGATGATGACTATGAATTGAAGCACAAACTTAGAGAACTCGAGATTTCATTGTTGGGGCCTGAACTGGATATTGGCAACAGTTTTCATTGCTGCTTCAAGGGTGACCTCCAAAGAGGATCTCCAATAGATACATATAATTGGCTTCTTATTGCGGAAATGATTCCGAAGTTAGACTTGAAAGAAGTCCTGGTTCTATGTGCAAGAGCCGTGTCGGATGAAGATTTTCAAACAGCAATAGGGTGGATGGATAATGTGTTAGTGAAGATGGTATCTGTTGCTGGGGAACCCATCCAGAGGTTAGGTGCTTACATGTTGGAGGGACTTAGAGCAAGGTTGGAATCATCCGGGAGTCTAATCTACAAAGCCTTGAAGTGTGAACAACCGACAAGCAAAGATCTAATGACTTACATGCATATCCTGTATCAGATTTGCCCGTATTTTAAGTTTGCTTACATATCTGCGAATGTCGTAATCGGAGAAGCAATGCAGAATGAATCGAGGATTCATATAATTGACTTCCAAATTGCACAAGGCACACAGTGGATGTTACTCATGCAAGCTCTTGCATCTAGGCCTGGTGGTCCTCCATTCCTTCATGTTACTGGCGTCGATGATCCCCAATCATTTCATGCTAGGGGTGGGGGACTTAACATTGTAGGGAAACGACTCTTGGAGTATGCCAAGTCTTGTGGAGTGCCATTTGAGTTCCATAGTGCCGCCATGTGTGGCAGTGAGGTTGAACTAGAAAACCTTGTAGTTCGACCCGAGGAAGCACTGGCTGTAAACTTCCCTTATGTTTTGCACCATATGCCGGATGAGAGTGTGAGCACGGAGAATCATAGAGACAGGCTGTTGAGATTAGTGAAGAGCTTGTTACCAAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCATAGATTTGTTGAGACCCTTGATTACTACAATGCTATGTTTGAATCTATAGACGTGGCTTGCCGCAGAGACGATAAGCAAAGGATTAGTGCTGAACAGCACTGCGTGGCTCGCGACATCGTCAACATGATAGCTTGTGAAGGGGCTGAAAGGGTTGAAAGGCATGAACCTTTTGGAAAGTGGAGGTCAAGATTTTCAATGGCTGGATTTGCAGCATATCCATTGAGTTCCTCAAATAGTGGTGCAGTTAGAAATATGTTGAATGAATTCAATGAAAATTATAGGCTTGCACATAGTGATGGTGTTCTTTATCTTGGTTGGAAAAATAGACCTATGTCTACCTCATCTGCATGGAGATGTAACTGA 1656 0.4354 MQTSRKHTTSPGINLYHQPVQGIDPNTSCQILQSNSSHDVDGSSSQGTIVSFETLKEQYFTLESSPATIGLIGCDSPSYASVSSNRSPFSPQGSQSYNSDQHQSSNNTYGSPVSVYSSADDDYELKHKLRELEISLLGPELDIGNSFHCCFKGDLQRGSPIDTYNWLLIAEMIPKLDLKEVLVLCARAVSDEDFQTAIGWMDNVLVKMVSVAGEPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPTSKDLMTYMHILYQICPYFKFAYISANVVIGEAMQNESRIHIIDFQIAQGTQWMLLMQALASRPGGPPFLHVTGVDDPQSFHARGGGLNIVGKRLLEYAKSCGVPFEFHSAAMCGSEVELENLVVRPEEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLLPKVVTLVEQESNTNTSPFFHRFVETLDYYNAMFESIDVACRRDDKQRISAEQHCVARDIVNMIACEGAERVERHEPFGKWRSRFSMAGFAAYPLSSSNSGAVRNMLNEFNENYRLAHSDGVLYLGWKNRPMSTSSAWRCN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0376 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Lal11g0376 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 548 IPR005202 -
Lal11g0376 551 MobiDBLite consensus disorder prediction 1 20 - -
Lal11g0376 551 MobiDBLite consensus disorder prediction 83 113 - -
Lal11g0376 551 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 548 - -
Lal11g0376 551 Pfam GRAS domain family 178 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0376 Lal-Chr11 2768876 2770531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0376 1 551 GRAS Transcription Factor Family AT4G17230 59.025 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal11g0376 GRAS 1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0376 - - gmx:100819190 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0236 3 1550520 1552178 Lal11g0376 11 2768876 2770531 LSH