Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0371 ATGAAACAGTTGTCTTTCCCTCTTCTTTGTCCAGATTGGAATTTAGATGATGAAATTCTGCTTCTAGAGGACATGTCTCTTATTGCTGGGAAAAACAGAAAAGAACTTATTGCCATGGCAAAAAGGCGGGGCGAAGACAAGAAAGATACTCAACTAGAGAATAATTTTGGAGGAGAGAAGCCAAATTCCCCTGAAAATGAAGGTGCTTCTTTAGTAGAATCCAGTGGTTATAATCCAAAAAGGCAACAATTTGATCCCGAATATGATAACGATGCTGAACAACTACTTGCTGAAATGGAATTTGACGATGCTGACACGGAGGAAGAGCGAGAGCTGAAACTACGTGTATTGCGTATCTATTCAAAAATGCTTGATGAAAGGAAACGTAGAAAGGATTTCATACTTGAGAGAAATTTATCAAATCCAAATCCATTTCAGGAGGATTTAACACCCGAGGAGAAGAAAATATGTCAAAAATATGACGTATACATGCGGTTTCATACGAAAGAAGAGCACGAGGAGTTGCTTAGAATAATTATCTTAGAACATAGAACTCGTAAAAGATTTCAAGAACTTAAGGAAGCGCGGACTGCTGGTTGCCGAAACTCAGCAGAAGCCGATATATATCTAGCGCGCAAGAGAAGGGAAGCTGAAGAAAGTGCTCATAGTGCAGAAAAAATGAATGTAGCATCATATTGTGAGGCAGATTTACTTTCTGAACCTGAAAAACATTTATGCTATGAGCTAAGGTTAATTCCAGCTATATATTTGAAGATGCAAGAGCAACTTTCTCTACAAATACTTTCTGGCATTGTTTCTTCAAAATCAGATGCTCATCAATTATTTCACATGGATCCTATGAAAATTGACAGGGTTTATGATATGCTCATCAAAAAAGGAATTGGCTTAGCCTGA 915 0.377 MKQLSFPLLCPDWNLDDEILLLEDMSLIAGKNRKELIAMAKRRGEDKKDTQLENNFGGEKPNSPENEGASLVESSGYNPKRQQFDPEYDNDAEQLLAEMEFDDADTEEERELKLRVLRIYSKMLDERKRRKDFILERNLSNPNPFQEDLTPEEKKICQKYDVYMRFHTKEEHEELLRIIILEHRTRKRFQELKEARTAGCRNSAEADIYLARKRREAEESAHSAEKMNVASYCEADLLSEPEKHLCYELRLIPAIYLKMQEQLSLQILSGIVSSKSDAHQLFHMDPMKIDRVYDMLIKKGIGLA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0371 304 MobiDBLite consensus disorder prediction 40 84 - -
Lal11g0371 304 ProSiteProfiles SWIRM domain profile. 218 304 IPR007526 GO:0005515
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 221 302 - -
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 25 - -
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 27 223 - -
Lal11g0371 304 MobiDBLite consensus disorder prediction 55 81 - -
Lal11g0371 304 MobiDBLite consensus disorder prediction 40 54 - -
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 221 302 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 25 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lal11g0371 304 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 27 223 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lal11g0371 304 Gene3D - 217 302 IPR036388 -
Lal11g0371 304 SUPERFAMILY Homeodomain-like 223 301 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0371 Lal-Chr11 2728468 2731837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0371 25 302 EF-hand Containing Proteins AT3G07740 41.358 9.07e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0371 K11314 - gmx:100811887 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0232 3 1528070 1534312 Lal11g0371 11 2728468 2731837 LSH