Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0370 ATGGGTCGTTCTCGCGGTAATTTTCACCATGCTGATGAGGACCCAAATCAAAGGTCAAGGAGAAAAAAGAATGCTGCAAGTGGAGAAAATTTAGAATCTGGAGTTGCAGGACAAGGAGTAAGTGATGGGAAAAGGGCTTTGTATCACTGTAATTATTGTAATAAAGATATTACAGGAAAAATCCGTACGAAGTGTGCCATGTGCCCAGACTTTGACCTATGTATAGAGTGTTTTTCTGTTGGAGCTGAGGTGACACCCCACAAAAGCAATCACCCTTACAGAGTTATGGATAATTTATCTTTCCCTCTTATTTGCCCAGACTGGAATGCAGATGATGAAATTCTGCTTTTAGAGGGAATTGAAATGTACGGCTTGGGAAATTGGACAGAAGTTGCTGAGCATGTTGGGACAAAGAACAAGGAATCATGCATTTATCACTTTAAGAATGTGTACTTGAATTCGCCATTCTTTCCTCTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCAAAAGGGCAGGGCGAGGATAAGAAAGGAATTTCCACGGGGGATCTTGGTTTAAAGGAAGAATCTCCTTTTTCTCCACCTACTAGAGTCAAAGGAGAAGATTCACATAAAGGTGGTTCCTCTAGTCGATTGCTTTCTAGTTTAAACTCAGAGTCAGAATCCGGTCCTGGTGGTATCAGCCATGCTTCAGTTGCTGCTAATCAGAAGGCATCCAATTCAGTCCGGGGAAAAGATGGTCCCGCAGTCATTAAAATGGAAGATCCTCAAGTAGACGGAAACTTTGGAAGCAAAAAGCCAAGTTCCTCTGGAAATGAAGGTCCTTCTTTAGTAGAACCAAGTGGTTATAACAAAAAAAGACAGGAATTTGATCCTGAATATGATAACGACGCTGAACAACTACTTGCTGAAATGGAATTTAAGAATGCTGACACGGAGGAAGAGCGGGAGCTGAAATTACGTGTATTGCATATCTATGGAAAAAGGCTTGATGAAAGAAATCGTAGAAAGCATTTCATACTCGACAGAAATTTGTTATACCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAGAAGGCAATATGTCGAAAATATGACTTATTCATGCGCTTTCATACCAAAGAAGAGCATGAAGAATTACTTAGAACAGTTATCTCTGAACATAGAACACTTAAAAGACTTCAAGAGCTTAAGGAAGCCCAGGCTGCTGGTTGCCGCAATGCAGCTGAAGCAGATAGATATCTGATGCATAAGAGAAGAAGGGTAGCAGAAGAAACTGCCTGTAGGGCTAAAGAAGCTGCTCAGGGGGTTCCAAATGCACTAATGTCTCCGGACTCTGCTGGCAAGGATTTGAGTACAAGACCCGCAGGTCCTGCTACTTCAAGCTCTGTCAATGAGATGGATGTTACAGGATACTACGGGGCAGATTTACTTTCTGAACCTGAGAAACGTTTATGCTGTGAGCTAAGGTTGTCTCCAGCCATATATTTGAAGATGCAAGAACGATTGTCTCTAGAAATACTTAGCGGCGCTGTATCTACAAAATCAGATGCTCATCAATTATTCAAGATGGATGCCATCAAAATTGACAGGGTATATGATATGCTCATTAAAAAGGGAATTGGTTCACCCTGA 1662 0.4146 MGRSRGNFHHADEDPNQRSRRKKNAASGENLESGVAGQGVSDGKRALYHCNYCNKDITGKIRTKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIYHFKNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGEDKKGISTGDLGLKEESPFSPPTRVKGEDSHKGGSSSRLLSSLNSESESGPGGISHASVAANQKASNSVRGKDGPAVIKMEDPQVDGNFGSKKPSSSGNEGPSLVEPSGYNKKRQEFDPEYDNDAEQLLAEMEFKNADTEEERELKLRVLHIYGKRLDERNRRKHFILDRNLLYPNPFEKDLTPEEKAICRKYDLFMRFHTKEEHEELLRTVISEHRTLKRLQELKEAQAAGCRNAAEADRYLMHKRRRVAEETACRAKEAAQGVPNALMSPDSAGKDLSTRPAGPATSSSVNEMDVTGYYGADLLSEPEKRLCCELRLSPAIYLKMQERLSLEILSGAVSTKSDAHQLFKMDAIKIDRVYDMLIKKGIGSP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0370 553 Coils Coil 303 323 - -
Lal11g0370 553 Pfam Zinc finger, ZZ type 47 88 IPR000433 GO:0008270
Lal11g0370 553 Gene3D - 41 96 IPR043145 -
Lal11g0370 553 MobiDBLite consensus disorder prediction 444 474 - -
Lal11g0370 553 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Lal11g0370 553 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Lal11g0370 553 SMART sant 104 153 IPR001005 -
Lal11g0370 553 MobiDBLite consensus disorder prediction 1 27 - -
Lal11g0370 553 MobiDBLite consensus disorder prediction 176 297 - -
Lal11g0370 553 ProSiteProfiles SWIRM domain profile. 467 553 IPR007526 GO:0005515
Lal11g0370 553 SUPERFAMILY RING/U-box 48 110 - -
Lal11g0370 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Lal11g0370 553 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Lal11g0370 553 Gene3D - 468 551 IPR036388 -
Lal11g0370 553 SMART zz_5 44 89 IPR000433 GO:0008270
Lal11g0370 553 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 552 - -
Lal11g0370 553 Gene3D - 102 153 - -
Lal11g0370 553 PIRSF Txn_adaptor_ADA2 35 553 IPR016827 GO:0003713|GO:0006357|GO:0035065
Lal11g0370 553 SUPERFAMILY Homeodomain-like 460 550 IPR009057 -
Lal11g0370 553 Pfam Myb-like DNA-binding domain 107 150 IPR001005 -
Lal11g0370 553 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 552 IPR034318 GO:0003713|GO:0006357|GO:0035065
Lal11g0370 553 MobiDBLite consensus disorder prediction 176 191 - -
Lal11g0370 553 CDD ZZ_ADA2 48 96 IPR041983 -
Lal11g0370 553 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Lal11g0370 553 MobiDBLite consensus disorder prediction 215 233 - -
Lal11g0370 553 MobiDBLite consensus disorder prediction 270 285 - -
Lal11g0370 553 CDD SANT 108 150 IPR001005 -
Lal11g0370 553 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0370 Lal-Chr11 2720588 2726409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0370 1 551 EF-hand Containing Proteins AT3G07740 45.234 2.44e-159 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal11g0370 Myb_DNA-binding 5.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0370 K11314 - gmx:100811887 946.806