Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0364 ATGGACATTTTCGCCGCCGACACTGTTTCTCCATTTCCCGATTCCGGCGATCTCATTTACGACGCTCTTTTTTCCACCACCGATATCCTCTCCCACCACTACCACAACCCCCAGAAGCTCCGTCCTATCCGCCCCAATGGAATCTCTTCTCCTCTCCACGATCCTAATCTTCAAACTATTCTCGATGCACCCGGGTCGGGTCATTATTACGGGTTCCCATTTCTTGGATCATCTTTGGATGATGATGAGAACAATGTTGATGACGACAATTCCTCAGGAAGTATGAAAGAACCTGGCTCAAGAAAGAGAAGCAAAAGGAAGGACGGAAAGCTTGAAAATTTTGTACAGAACTTGGTAATGGAGATGATGGAAAAGCAAGAGCGCATGCATAAACAATTGGTGGACATGATAGAACAGAAAGAAAGTGAAAGAATAATGAGAGAAGAAGCTTGGAGGCGTGAGACGATGGAAAGAATTAAAAATGATGAAGAGGCTAGAGCAGAAGAAAAGTCTCGTAGTTTAGCGATCATATCTTTCATTCAGAATCTAATCGGCCATGAAATTCAAATCCCCCAACCAGTCGAAGGTGACGCGATCGTCCAAAAAAATTCCATCGCTGATCAGAATAACACTAGATGGCCAGATATTGAGGTACAAGAACTCATAACTTTAAGAACTTCCTTGGAACACAAGTTTCAGGTTATGGGACCTAAAGGGTCGATGTGGGAGGAGATATCAGAAGCAATGCATAAAAAGGGCTTCAACCGATCTGTGAAGAAGTGTAAGGAAAAATGGGAAAACATCAACAAGTACTATAAAAGAACAGTGAGAAATGGCAAGAAAAGGCGTCAGAATAGTAAAGCTTGCCCTTACTTTGATGAGTTAGACTCTCTGTATAGAAATGGCATCCTCATCCATGGAAGTGCATCAAGCAATACCAACAATGTTAACAAGATTGAAAATGTGGAAAGTAGAACTCAATAA 984 0.4197 MDIFAADTVSPFPDSGDLIYDALFSTTDILSHHYHNPQKLRPIRPNGISSPLHDPNLQTILDAPGSGHYYGFPFLGSSLDDDENNVDDDNSSGSMKEPGSRKRSKRKDGKLENFVQNLVMEMMEKQERMHKQLVDMIEQKESERIMREEAWRRETMERIKNDEEARAEEKSRSLAIISFIQNLIGHEIQIPQPVEGDAIVQKNSIADQNNTRWPDIEVQELITLRTSLEHKFQVMGPKGSMWEEISEAMHKKGFNRSVKKCKEKWENINKYYKRTVRNGKKRRQNSKACPYFDELDSLYRNGILIHGSASSNTNNVNKIENVESRTQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0364 327 MobiDBLite consensus disorder prediction 81 110 - -
Lal11g0364 327 Gene3D - 213 274 - -
Lal11g0364 327 CDD GT1 212 275 - -
Lal11g0364 327 MobiDBLite consensus disorder prediction 94 110 - -
Lal11g0364 327 PANTHER - 76 321 - -
Lal11g0364 327 ProSiteProfiles Myb-like domain profile. 205 269 IPR001005 -
Lal11g0364 327 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 76 321 - -
Lal11g0364 327 Pfam Myb/SANT-like DNA-binding domain 211 298 IPR044822 -
Lal11g0364 327 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0364 Lal-Chr11 2692232 2694263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0364 99 301 Trihelix Transcription Factor Family AT5G47660 41.410 1.71e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal11g0364 Myb_DNA-bind_4 2.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0364 - - pvu:PHAVU_006G139200g 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1536 5 17983064 17985441 Lal11g0364 11 2692232 2694263 LSH