Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0357 ATGGACTCGAAAACTAGTTCTAGAGCTCTACCGAAACATCATCAGAAGACGGCTGGGATTGAAGCCCTTGAGGCAAAAGATATCGGGCCTCCTTCACTGCCAGATTCAAAGGCAGGCAAACCCGATGTCGATGCACATGAAGATATATTAAAGTCTGTGCAAAATTCATCAAGGCAGAATACTGTAGAAATTCCTGACATCATGAAGTTAGGAATTTCAGCCCAAACGGGATCTACTTCCTCATCTGCCCTCGACAAAAAAGTGGATCCAGCTGTTAATGAGAACATAGGCTCACAGGAAAGCACTATTGATCAGGACAAAAAGAAATCAGGATATGGAAGTGTGAAGAACAGTTGTGTTTCCTCTAAAGGTAGCGACAGGGCCAGTGGCCTTGCAAAGACAAGTGGAAGTGCCAAGATCAGTGAACGTGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGTGATGAGAGTACATGTAGTAGCTTTAGCAGCAGCATAAACAAGCCTCACAAGGCAAATGACATGAGTTGGGAAGCTATCCAAGTTCTTCGAACAAGAGATGGAGTATTGGGTTTAAGTCACTTTAGACTGCTGAAGAGGTTGGGTTGTGGTGATATCGGTAGTGTATATCTCTCTGAGTTGAGTGGAACTAAATGTCACTTTGCGATGAAGGTGATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTCCTTCGTGCCCAGACAGAGAGAGAAATTCTGCAGTCACTTGACCACCCCTTTCTTCCAACTTTGTATACTCATTTTGAGACGGAGAAATTCTCATGCTTGGTAATGGAGTTCTGCCCTGGTGGAGACCTTCATACACTTCGGCAGAAGCAGCCAGGGAAGCATTTTCCCGAGCAGGCAGTGAAATTTTACGTGGCAGAGGTCCTACTCGCTATGGAGTACCTCCACATGCTTGGAATTGTCTACCGCGACTTGAAGCCCGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGTTGTGCTGTTAGTCCAACCCTTGTTAAAAGCACAACTACGGATTCTGAGCTTTTAAGAAGGAATCCAACATATTGTGCTCAGCCTGCATGTATTCAACCACCTTCCTGCATCCAGCCATCATGTGTTGCTCCTACCACATGCTTTTCACCGCGGTTCTTCTCTAGCAAATCAAAGAAGGACCGCAAGCCCAAGAACGAGATTGGCAACCAAGTAAGTCCGTTACCTGAGCTCGTTGCTGAGCCTACCGATGCTCGGTCAATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATTAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTACGGAATCTTTCTATATGAGTTGTTGTTTGGTAAGACTCCTTTCAAGGGATCTGGGAACCGAGCAACATTGTTTAATGTTGTAGGTCAGCCGCTGCGATTTCCAGAAGCGCCTGTTGTGAGTTTTGCAGCAAGGGATCTTATAAGAGGGTTGCTTGTAAAGGAACCTCAGCACAGATTGGCATATAAAAGAGGTGCTACTGAGATTAAGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCATTGATCCGTTGTGCTACCCCACCCGAGATTCCGAAGCCTGTAGAGTTCGAGAAGGTACCTTCACCAGCCTCATCAGCTCTTGAAAAACCTGTCAATCATATGTCAATAGCTAATAATCAGAAAGGTTCTGATAATTATCTGGAATTTGATTTCTTCTAG 1806 0.4513 MDSKTSSRALPKHHQKTAGIEALEAKDIGPPSLPDSKAGKPDVDAHEDILKSVQNSSRQNTVEIPDIMKLGISAQTGSTSSSALDKKVDPAVNENIGSQESTIDQDKKKSGYGSVKNSCVSSKGSDRASGLAKTSGSAKISERADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDMSWEAIQVLRTRDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCHFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSTTTDSELLRRNPTYCAQPACIQPPSCIQPSCVAPTTCFSPRFFSSKSKKDRKPKNEIGNQVSPLPELVAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEFEKVPSPASSALEKPVNHMSIANNQKGSDNYLEFDFF 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0357 601 MobiDBLite consensus disorder prediction 112 134 - -
Lal11g0357 601 Gene3D Transferase(Phosphotransferase) domain 1 437 561 - -
Lal11g0357 601 CDD STKc_phototropin_like 203 567 - -
Lal11g0357 601 MobiDBLite consensus disorder prediction 408 429 - -
Lal11g0357 601 ProSiteProfiles Protein kinase domain profile. 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0357 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Lal11g0357 601 MobiDBLite consensus disorder prediction 72 86 - -
Lal11g0357 601 Gene3D Transferase(Phosphotransferase) domain 1 289 358 - -
Lal11g0357 601 Gene3D Phosphorylase Kinase; domain 1 203 288 - -
Lal11g0357 601 Pfam Protein kinase domain 206 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0357 601 Pfam Protein kinase domain 440 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0357 601 PANTHER FLIPPASE KINASE 1-RELATED 3 601 - -
Lal11g0357 601 MobiDBLite consensus disorder prediction 1 21 - -
Lal11g0357 601 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 601 - -
Lal11g0357 601 SMART serkin_6 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal11g0357 601 MobiDBLite consensus disorder prediction 1 134 - -
Lal11g0357 601 SUPERFAMILY Protein kinase-like (PK-like) 178 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0357 Lal-Chr11 2622453 2626735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0357 102 601 AGC Kinase Gene Family AT5G47750 83.532 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal11g0357 Pkinase 8.7e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0357 11 2622453 2626735 Lal11g0357 11 2622453 2626735 ECH
Lal5g1543 5 18035527 18039692 Lal11g0357 11 2622453 2626735 LSH
Lal3g0218 3 1450767 1455263 Lal11g0357 11 2622453 2626735 LSH