Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0346 ATGTATCATACAAATAACTTTCCTAGTCAAAGTCTAATTGGAAGCAATTCATTAGTTCATGATCAGCAAATAGATTGTGGTGGCAGCACAATGGATCCTGACAACGGAGGAAACAGTCTCACCAACAACCCTAATCTCTCCTCAAAGCAACGTTTACGTTGGACACATGAGCTACATGAACGCTTTGTGGATGCTGTGGCACAACTTGGTGGACCAGATCGTGCCACACCCAAAGGGGTCCTCAGAGTTATGGGTGTGCAAGGCTTAACAATTTATCACGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAATACCTACCTGATTCCTCATCCGATGAGGGGAAAAATGCTGAGAAGAAAGAAACCGGGGATGTTCTTTCCAACCTCGATGGTTCATCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGATTACATGAACAATTGGAGGTGCAAAGACAGCTTCAACTACGAATCGAAGCTCAAGGTAAATACTTGAAAAAGATAATTGAAGAGCAACAGCGGCTAAGTGGAGTTCTTTCAGATGCACCTGATTCCGGGGTTACAGCTTCAGCTCAAGGAGATATGTGCCAAGAACATGATAACAAGACTGACCCGGCAACCCCTGACCCTGAAAAGGCTGCCAAAGAGCGTGCCCCGACAAAGAGTCTCTCGATTGAATCTTTTTCATCTCACCATGAACCATGGACTCCTGATTCCGGCTGCCATGTTGGTCCCCCGGCTGAGAGTCCTAAAGGGGAGAGATCAAGCAAGAAGCAAAGGGTAAGCATGGAAGAAGCAGCATATTCTAAGCAAGACATGGTGCTTCCACATCAAATACTAGAGTCAAGTATGTCATCATACCAGCAGGCAAATACTGTTTTCCTTTGCCAAGAGCAATTTGACCCTTCATTGAGAGGTATATCTTGCAGGAATGGTGAGGAGTTGGAGAAAAAGTAA 981 0.4465 MYHTNNFPSQSLIGSNSLVHDQQIDCGGSTMDPDNGGNSLTNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKNAEKKETGDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSDAPDSGVTASAQGDMCQEHDNKTDPATPDPEKAAKERAPTKSLSIESFSSHHEPWTPDSGCHVGPPAESPKGERSSKKQRVSMEEAAYSKQDMVLPHQILESSMSSYQQANTVFLCQEQFDPSLRGISCRNGEELEKK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0346 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 4 320 - -
Lal11g0346 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Lal11g0346 326 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Lal11g0346 326 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Lal11g0346 326 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Lal11g0346 326 MobiDBLite consensus disorder prediction 259 273 - -
Lal11g0346 326 Coils Coil 139 159 - -
Lal11g0346 326 MobiDBLite consensus disorder prediction 108 132 - -
Lal11g0346 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Lal11g0346 326 MobiDBLite consensus disorder prediction 23 47 - -
Lal11g0346 326 MobiDBLite consensus disorder prediction 184 277 - -
Lal11g0346 326 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 320 IPR044848 GO:0003700
Lal11g0346 326 MobiDBLite consensus disorder prediction 205 227 - -
Lal11g0346 326 MobiDBLite consensus disorder prediction 108 126 - -
Lal11g0346 326 Gene3D - 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0346 Lal-Chr11 2529883 2535241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0346 84 314 G2-like Transcription Factor Family AT2G01060 64.583 2.80e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal11g0346 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0346 - - lang:109334185 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1554 5 18129108 18136757 Lal11g0346 11 2529883 2535241 LSH