Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0336 ATGGAAGAGACCTTTCTTCGCTGTGAACAATTGCTAGATGGTGCATGCAATGAGGTTCAGAAAGAAGAAGATGGTGCACTCATTGAGTTAGATTGTCAAAATGGTTTTTCTGATGGGAGAAGGGAATTTGTTGCACCGGCTATTGGAATGGAGTTTGAGTCGTATGATGATGCTTACAATTACTATATCTGCTATGCCAAGGAGGTGGGATTTTGTGTAAGGGTGAAAAATTCATGGTTCAAGCGAAATAGTAGAGAAAAATATGGTGCAGTTCTTTGCTGTAGCAGCCAGGGTTTCAAAAGAATAAAAGATGTTAACCATTTAAGAAGAGAAACGAGAACCGGTTGTCCTGCAATGATAAGGGTGAGGTTAGTGGATTCTCAGAGGTGGAGGATACTCGAGGTTACACTTGACCATAACCACGTGTTAGGTTCAAAGATATGCAAATCAGTTAAGAAGACGGGAACTGGAACCAAAAGGAAGTCATTGACTAGTTCTGATGCGGAAGTACAAACAATTAAGTTATACCGTGCACTTGTGGTAGATACAAGAGGTAATAGTAATTCAAACTCCGGTGTACCAGAAGACAGAACTTTCTCTGAATCTTCTAATAAGCTGAACCTTAAAAAAGGTGACACACAAGCCATTTATAATTTCCTCTGCCGTATGCAATTGACTAATCCAAATTTCTTTTACTTGATGGATTTCAATAAGGAAGGGCATTTGAGGAATGCATTCTGGGTTGATGCTAGGTCCAGGGCCGCTTGTGGTTATTTTGGCGATGTTATCTTTTTTGACAACACTTATTTGTCAAATAAATATGAAGTCCCTCTTGTTGCTTTTGTTGGAATAAATCACCATGGTCAATCTGTGTTATTAGGCTGTGGTCTGCTTGCCAGTGAAACAACAGAGTCTTATATATGGTTGTTCAAAACTTGGGTTACATGTATGTCAGGGTGTTCTCCCCAAACTGTTATTACTGATAGATGCAAGGCCTTGCAGAGTGCGATTGTGGAAGTTTTTCCTAGATCTCAACATTGTTTTAGCCTGTCATTAATAATGAAGAAAGTACCAGAAAAGTTGGGAGGGTTGCCCAATTATGATGCAATCAGAAAAGCACTTAGTAAAGCAGTGTATGAAACATTAAAAGTGATTGAATTTGAAGCAGCATGGGGATTTATGATTCAGCATTTTGGAGTTATTGATCATGAGTGGCTCTGTTCTTTATATGAAGATCGAGTTCGTTGGGCACCCGTTTACTTGAAGGACAGATTTTTTGCTGGAATGTCTGCAGCATGCCCAGGTGAGAGCCTTAGTCCATTTTTTTATAGATATGTACACAAACAAACTCCTTTGAAGGAGTTTCTTGATAAGTACGAATTAGCACTCCACAAGAAGCACAAGGAAGAATCTGATGCAGATATTGAATCAAGAAGTTCAAGCCCATCACTGAAGACCAGATGTTCTTTCGAATTGCAGCTGTCTAGAATGTACACTAGAGAAATATTCATGAAGTTCCAATACGAAGTGGAAGAAATGTATTCTTGTTGTGGTACAACAAAACTACATGTGGATGGTCCAGTCGTAATTTTCTTGGTCAAGGAGCGTGTTTTGAGTGAGGGAAATAAGCGGGAGATTAGGGATTTTGAAGTTCTGTACAGTAGGACGGCAGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATTTATGTCGGCATGCACTGTGTGTACTCAATTTTAATGGGGCAGAAGAGATACCATCCAAATACATTCTTCCAAGATGGAAGAAAGATTACAAGCGACTTTATGTTCCTGATCACAGCTCAGGTGATGCTAATGATGCTGACCGTATACAATGGTGTGATCAGTTATTTAGAAGTGCCTTGCAAGTTGTCGAGGAGGGGATAATTTCTCTAGACCATTACAATGTAGCTTTGCAGGCTTTTCAAGAATCACTTAGTAAGGTTCATGATGTAGAACAGAGACAGCAGTAA 2004 0.3942 MEETFLRCEQLLDGACNEVQKEEDGALIELDCQNGFSDGRREFVAPAIGMEFESYDDAYNYYICYAKEVGFCVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRRETRTGCPAMIRVRLVDSQRWRILEVTLDHNHVLGSKICKSVKKTGTGTKRKSLTSSDAEVQTIKLYRALVVDTRGNSNSNSGVPEDRTFSESSNKLNLKKGDTQAIYNFLCRMQLTNPNFFYLMDFNKEGHLRNAFWVDARSRAACGYFGDVIFFDNTYLSNKYEVPLVAFVGINHHGQSVLLGCGLLASETTESYIWLFKTWVTCMSGCSPQTVITDRCKALQSAIVEVFPRSQHCFSLSLIMKKVPEKLGGLPNYDAIRKALSKAVYETLKVIEFEAAWGFMIQHFGVIDHEWLCSLYEDRVRWAPVYLKDRFFAGMSAACPGESLSPFFYRYVHKQTPLKEFLDKYELALHKKHKEESDADIESRSSSPSLKTRCSFELQLSRMYTREIFMKFQYEVEEMYSCCGTTKLHVDGPVVIFLVKERVLSEGNKREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGAEEIPSKYILPRWKKDYKRLYVPDHSSGDANDADRIQWCDQLFRSALQVVEEGIISLDHYNVALQAFQESLSKVHDVEQRQQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0336 667 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
Lal11g0336 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 664 IPR031052 GO:0006355
Lal11g0336 667 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Lal11g0336 667 SMART 26again6 560 587 IPR006564 GO:0008270
Lal11g0336 667 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 20 664 - -
Lal11g0336 667 MobiDBLite consensus disorder prediction 185 204 - -
Lal11g0336 667 Pfam SWIM zinc finger 560 581 IPR007527 GO:0008270
Lal11g0336 667 Pfam MULE transposase domain 262 356 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0336 Lal-Chr11 2473999 2476791 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0336 MULE 5.8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0336 - K17604 gmx:100796448 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1564 5 18202756 18205110 Lal11g0336 11 2473999 2476791 LSH