Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0335 ATGACTGATGATACTATGTGTTCTCTGAATGATAAGGGCTTGTCGCTGAGTCCTAATGTCGATATTGCGTTAGAGGGAAGTGGGTGGGTAAATGAAAGAAACTTCATGCCAGTCAGCGAAACTGGAAAAGCTATCTATATACATGTCGGATCTCCAAACAGTGAGCAACTAATCGAGGTTGAGGATGACGGCAACAGACTTGAGAATGACTGCAGTCAATTATTTGAGATTGATGGAAGTGAACTTGAAAATAGCAGGGATGAAACAACAGTAGCCAATAGTCATAGCAGAGAATCTCAAGGAAAAGACTACCTCCCACCGGTTGTGGGAATGGAGTTTGATACTTATGATGATGCCTACAACTATTATAATAGCTATGCCAAGGAAACTGGATTTGCTATTCGTGTAAAATCTTCATGGACCAAACGCAACAGCAAAGAGAAGCGTGGTGCTGTGCTTTGCTGCAACTGTGAAGGTTTTAAAACAGTTAAAGAAGCAAATAGTCACAGGAAAGAAACAAGAACCGGCTGTTTAGCAATGATAAGATTGAGGTTAGTGGAATCTAACAGGTGGAGGGTGGATGAAGTCAAGCTTGAGCATAATCATTCATTTGATCTTGAGAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTGGGACCAAAAGAAAATCTGAGCCAACTCAAGATGTTGAAGTTCGAACGATCAAGTTATATCGAATGCCAGTTGTAGATGCATCAGGTTATGGAAGCTCAAATTCTAATGAAGGGGGAACTAGCAGCAACATAAATTTTTCCCAGAGTTTGAAACTTAAAAAAGGTGATGCTGAACTTATTTCAAATTACATGTGCCGCAGTCAACTTATGAATCCCAATTTCTTTTATGTGATGGATCTGAATGATGATGGACAACTAAGGAACATATTTTGGATCGACTCTAGATCTAGGGCTGCATATGGTTATTTTGGTGATGTGGTCGCATTTGACTCAACATGTTTGTCAAACAATTATGAGATTCCACTTGTTGCATTTGTTGGTATTAATCACCATGGGCAATCTGTTTTATTTGGATGTGGTCTGCTTGCCGATGAGACATATGAAACATACATTTGGTTATTTAGGGCGTGGCTTACGTGCATGTCTGGGCGCCCCCCACAAACCTTTATTACAAACCAGTGTAAGGCCATGCAAAGTGCAATAGCAGACATTTTCCCGAGAGCTCACCACAGAATTTGTCTATCACAAGTCGTGCAAAGCATTCTTGGATGTTTGGTGCAATTTCAGGAATATGTAGCATTTCAGATGGGACTGAATAAAGTGATATATAATTCTAAAACAGTAGATGAATTTGAAAGAGATTGGGATGATCTGACCCAGAAGTTTGGAATACGAAATCATGAAAAGCTTCAAACTTGGCATGAGGAACGAGAGCACTGGGCACCAGTTTACTCCAAGGACACATTTTTTGCCGGAATTTCTGATTATGAGAACGGTGAGTCTGTGGTTCCTTTCTTTAAGGGTCATGTGCATCAACAAACTTCATTAAAAGAATTTTTTGAGATTTATGAATTAGTTATGCAAAAAAAACATAAAATTGAAGCTCTTGATGATTTGGAGTCACGAGACTCAAGTCCATTACTGAAGACAAGATGCTATTATGAGCTGCAGCTCTCGAAATTGTACACAAATGCAATATTCAGGAAGTTCCAAGATGAAGTGGTGATGATGCCCTCTTGTTTCAGCATCACAGAGATTCAAACAAGTGGTTCTATAGTGACATACATGGTAAAAGAAGGTCAAGGTGAAGAAATTGTGCAAGACGTTACACATTGTGAAGTCATGTACGATAAAGCTGGAGCAGAAGTACGCTGCGTTTGTAGTTGCTTTAACTTCAAAGGCTATCTATGCAGACATGCCTTATGTATCCTTAATTACAACGGCGTGGAGGAAATTCCATGTCAGTATATTTTGTCGAGATGGAGGAAGGATTTTACGCGATTGTATGTACCGCAGCTCGTCTCAGATAGTGTTGATATTACCAACCCAGTTCAATGTTTTGATCATTTGTACAAACGTGCTATGCAAGTTGTTGAAGAAGGGATGATATCCCAGCATCATTATATGCTTGCTTGCCAAACATTTAAAGAGTCCTTGAATAAGATTAGCCTTGTAGCAGACAAGATTGAATGA 2193 0.3949 MTDDTMCSLNDKGLSLSPNVDIALEGSGWVNERNFMPVSETGKAIYIHVGSPNSEQLIEVEDDGNRLENDCSQLFEIDGSELENSRDETTVANSHSRESQGKDYLPPVVGMEFDTYDDAYNYYNSYAKETGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDLERAQNSKSHKRMDSGTKRKSEPTQDVEVRTIKLYRMPVVDASGYGSSNSNEGGTSSNINFSQSLKLKKGDAELISNYMCRSQLMNPNFFYVMDLNDDGQLRNIFWIDSRSRAAYGYFGDVVAFDSTCLSNNYEIPLVAFVGINHHGQSVLFGCGLLADETYETYIWLFRAWLTCMSGRPPQTFITNQCKAMQSAIADIFPRAHHRICLSQVVQSILGCLVQFQEYVAFQMGLNKVIYNSKTVDEFERDWDDLTQKFGIRNHEKLQTWHEEREHWAPVYSKDTFFAGISDYENGESVVPFFKGHVHQQTSLKEFFEIYELVMQKKHKIEALDDLESRDSSPLLKTRCYYELQLSKLYTNAIFRKFQDEVVMMPSCFSITEIQTSGSIVTYMVKEGQGEEIVQDVTHCEVMYDKAGAEVRCVCSCFNFKGYLCRHALCILNYNGVEEIPCQYILSRWRKDFTRLYVPQLVSDSVDITNPVQCFDHLYKRAMQVVEEGMISQHHYMLACQTFKESLNKISLVADKIE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0335 730 MobiDBLite consensus disorder prediction 82 103 - -
Lal11g0335 730 MobiDBLite consensus disorder prediction 206 230 - -
Lal11g0335 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 51 726 - -
Lal11g0335 730 Pfam MULE transposase domain 326 419 IPR018289 -
Lal11g0335 730 Pfam FAR1 DNA-binding domain 121 204 IPR004330 -
Lal11g0335 730 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 726 IPR031052 GO:0006355
Lal11g0335 730 SMART 26again6 623 650 IPR006564 GO:0008270
Lal11g0335 730 ProSiteProfiles Zinc finger SWIM-type profile. 612 648 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0335 Lal-Chr11 2468483 2472943 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal11g0335 MULE 8.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0335 K17604 - gmx:100796448 1220.3