Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0321 ATGCCACTTTCTATGCACAAAGATATTAACAACATCATGGATTCAAGCAAGTATGTGAGGTATACACCAGAACAAGTGGAGGCTTTAGAAAGGGTCTATGCTGAATGCCCAAAGCCAAGTTCTATTAGGAGACAACAACTCATTAGGGAGTGTCCTATACTCTCTAACATTGAACCAAAACAGATCAAAGTCTGGTTTCAGAATCGAAGATGTCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTGCAGACAGTGAATAGAAAGCTATCTGCAATGAACAAGCTATTGATGGAAGAAAATGATCGATTGCAGAAGCAAGTTTCACATCTTGTTTATGAAAATGGTTATATGAAGCAACAAATAACCACTGTATCTGCTACTACCACTACAGACAATAGCTGTGAGTCTGTGGTGATGACTGGTCAAAATCAACAGCAAAACCCAACACCTCATCAACATCCTCAAAGGGATGCTAACAACCCAGCTGGTCTCCTCGCCGTGGCGGAGGAGACCCTGGCAGAGTTCTTGTCCAAGGCTACTGGAACTGCTGTCCACTGGGTTCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGCATTGTCGCTATTTCCCGAAACTGTAGTGGAGTAGCAGCACGTGCCTGTGGCCTTGTGAGTCTAGAACCCACAAAGGTTGCCGAGATTCTTAAAGATCGATTGTCGTGGTATCGTGACTGTAGATGCCTTGATGTGTTGAGCATAGTTCCCACAGGGAATGGCGGCACAATAGAGCTCATGTATATGCAGACTTATGCGCCGACTACATTGGCAGCAGCACGTGACTTTTGGACACTACGATACACCACAAGTTTAGAAGATGGAAGTCTTGTGGTATGTGAGAGATCATTGACTACTTCAACCGGTGGCCCGACAGGGCCCCCATCTTCGAACTTTGTAAGAGCCGAAATGCTTCCTAGTGGCTATCTAATCAGGCCATGTGATGGGGGTGGATCCATTATTCATATTGTTGATCATGTTGATTTAGATGTCTGGAGTGTGCCTGAAGTATTGAGGCCCCTCTACGGGTCGTCAAAAATATTGGCTCAGAAATTGACTATAGCTGCCCTCCAACATATACGACAAATTGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGGGGACGCCAGCCTGCTGTTTTAAGGACATTGAGTCAGAGACTTTGTAGGGGGTTCAATGATGCTGTGAATGGGTTTGTTGATGATGGTTGGTCCTTGATGGGCAATGATGGGGTAGATGATGTGACTATAGCCGTAAACACATCTCCCAACAAATATTTAACATCCCAGCACAGTTCATCAATGTTCCCGACATTTGGAGGTGGGGTCATGTGTGCCAAAGCATCAATGCTGCTTCAGAATGTTCCACCTGCTTTGCTTGTTCGTTTCTTGAGGGAGCATCGGTCAGAGTGGGCTGATTATGGGGTTGATGCATATTCTGCTGCATGTCACAGAGCTAGTCCCTATGCAGTTCCTTGTGCAAGACCTGCTGATTTCCCCACCAGCCAGATCATTTTACCTCTTGCTCATACAATTGAACATGAGGAGTTCTTGGAGGTTGTTCGTATAGAGGGTCATGCATTTCCCCCTGAAGACGTGTCATTGGCGCGGGATATGTATCTACTACAGCTGTGCAATGGGGTTGATGAAAATTCAATTGGGGCATGTGCTCAACTTGTTTTTGCTCCTATTGATGAATCATTTGCCGATGATGCTCCTTTACTGGCTTCTGGTTTCCGTGTCATACCATTGGCTCCTAAACCTGATGCTACAGCAACAACTCGGACTCTTGATTTGGCATCAACACTTGAAGTAGGATCTGGTATTACTCGTCCAGCTGGTGAAGCTGATTACAACCTTAGGTCGGTCCTAACTATTGCATTCCAATTTACCTTCGAGAACCATCTGCGAGACAATGTGGCTGCTATGGCTCGGCAGTATGTGCGTAGTGTTGTGGGATCTGTTCAAAGGGTTTCCATGGCAATTGCTCCCTCTCAGCTCAGTACCCAAGTGGGGCCAAAGTCTCTACCCGGTTCACCAGAGGCTCTTACTTTAGCTCAGTGGATTTGTAGAAGCTACAGGATCCACACCGGTGCAGAACTCTTTCATGTTGAGTCGACATCTGGTGATGCAATCTTGAAACAACTCTGGCACCATTCAGATGCAATCATGTGCTGTTCTGTAAAAACAAATGCTTCTCCGGTGTTCACCTTCGGAAACCAGGCTGGACTTGACATGCTTGAAACTACTCTAGTTGCACTTCAAGATATAATGCTTGATAAAGTTCTTGATGAAGCTGGTAGAAAAGTTCTTTTCTCTGAGTTCTCCAAGATAATGCAACAGGGATTTGCATATCTACCAGCAGGAATATGCATGTCCAGTATGAATCGTCCAGTGTCTTATGAACAAGCCATTGCATGGAAAGTTCTTAATGATGATGATTCTAATCACTGTCTGGCTTTCATGTTCATGAACTGGTCTTTTGTCTGA 2532 0.4506 MPLSMHKDINNIMDSSKYVRYTPEQVEALERVYAECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQITTVSATTTTDNSCESVVMTGQNQQQNPTPHQHPQRDANNPAGLLAVAEETLAEFLSKATGTAVHWVQMIGMKPGPDSIGIVAISRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVVCERSLTTSTGGPTGPPSSNFVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLDVWSVPEVLRPLYGSSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTLSQRLCRGFNDAVNGFVDDGWSLMGNDGVDDVTIAVNTSPNKYLTSQHSSSMFPTFGGGVMCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACHRASPYAVPCARPADFPTSQIILPLAHTIEHEEFLEVVRIEGHAFPPEDVSLARDMYLLQLCNGVDENSIGACAQLVFAPIDESFADDAPLLASGFRVIPLAPKPDATATTRTLDLASTLEVGSGITRPAGEADYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVSMAIAPSQLSTQVGPKSLPGSPEALTLAQWICRSYRIHTGAELFHVESTSGDAILKQLWHHSDAIMCCSVKTNASPVFTFGNQAGLDMLETTLVALQDIMLDKVLDEAGRKVLFSEFSKIMQQGFAYLPAGICMSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSFV 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0321 843 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Lal11g0321 843 MobiDBLite consensus disorder prediction 139 159 - -
Lal11g0321 843 ProSiteProfiles START domain profile. 157 354 IPR002913 GO:0008289
Lal11g0321 843 Coils Coil 82 106 - -
Lal11g0321 843 Gene3D - 195 378 IPR023393 -
Lal11g0321 843 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Lal11g0321 843 Pfam START domain 167 374 IPR002913 GO:0008289
Lal11g0321 843 SMART HOX_1 14 80 IPR001356 GO:0003677
Lal11g0321 843 CDD bZIP 69 108 - -
Lal11g0321 843 Pfam MEKHLA domain 698 842 IPR013978 -
Lal11g0321 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 7 843 IPR044830 GO:0003700
Lal11g0321 843 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Lal11g0321 843 MobiDBLite consensus disorder prediction 139 156 - -
Lal11g0321 843 CDD homeodomain 17 77 IPR001356 GO:0003677
Lal11g0321 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 7 843 - -
Lal11g0321 843 Gene3D - 11 83 - -
Lal11g0321 843 CDD START_ArGLABRA2_like 161 377 - -
Lal11g0321 843 SUPERFAMILY Bet v1-like 167 378 - -
Lal11g0321 843 SMART START_1 166 376 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0321 Lal-Chr11 2326174 2331388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0321 1 843 Homeobox Transcription Factor Family AT2G34710 77.661 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal11g0321 START 5.2e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0321 K09338 - gmx:100779499 1486.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0321 11 2326174 2331388 Lal11g0321 11 2326174 2331388 ECH
Lal5g1590 5 18389605 18395151 Lal11g0321 11 2326174 2331388 LSH
Lal3g0179 3 1204377 1209314 Lal11g0321 11 2326174 2331388 LSH