Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0320 ATGCTATCTGAAGATAACAAAGCGGATGGCCAGCAGCAACCAGAATCACAGATGCAATCTTTATCTTCAAATGGAATTTCTCAATTGGGTATTGGCACACAGGATGTTCAGTATGGAACACCTCCGCCGCTCGGAACTGGGCATGCTATGGGACCACCTGCCTATCCATATCCGGACCCGTACTACAGAAGTATATTTGCCCCCTATGATACGCAACCTCATCCACCAGGACCCCCACAAATCTATGGTGGACAGCCAATGGTCCATCTTCAGTTAATTGGAATGCAACAACCCGGTGTTCCTTTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCGAAACAGTATCATGGTATATTAAGGCGTAGGCAGTCCCGCGCTAAAGCTGAATCAGAAAATAAAGCTATAAGGAACCGGAAGCCATACCTGCATGAATCTCGGCATTTGCATGCACTGAGAAGAGCAAGAGGATGTGGAGGTCGGTTTCTGAATGCGAAGAAAGATGAGGAGGATCAACATAAGGACTCATCAACCGGTCTCAATTCTGATAAAAATGATGTAGAGCCATCGGATAGACCATCCTAA 591 0.4653 MLSEDNKADGQQQPESQMQSLSSNGISQLGIGTQDVQYGTPPPLGTGHAMGPPAYPYPDPYYRSIFAPYDTQPHPPGPPQIYGGQPMVHLQLIGMQQPGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHLHALRRARGCGGRFLNAKKDEEDQHKDSSTGLNSDKNDVEPSDRPS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0320 196 MobiDBLite consensus disorder prediction 155 196 - -
Lal11g0320 196 MobiDBLite consensus disorder prediction 1 35 - -
Lal11g0320 196 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 109 164 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 ProSitePatterns NF-YA/HAP2 subunit signature. 112 132 IPR018362 GO:0003677|GO:0016602
Lal11g0320 196 ProSiteProfiles NF-YA/HAP2 family profile. 107 167 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 Gene3D - 107 168 - -
Lal11g0320 196 SMART cbf3 106 167 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 PRINTS CCAAT-binding transcription factor subunit B signature 110 132 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 PRINTS CCAAT-binding transcription factor subunit B signature 141 164 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 MobiDBLite consensus disorder prediction 163 196 - -
Lal11g0320 196 MobiDBLite consensus disorder prediction 1 54 - -
Lal11g0320 196 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 5 186 IPR001289 GO:0003700|GO:0006355
Lal11g0320 196 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0320 Lal-Chr11 2319674 2322574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g0320 45 179 CCAAT-HAP2 Transcription Factor Family AT1G30500 72.593 3.03e-64 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lal11g0320 CBFB_NFYA 7.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0320 K08064 - gmx:100809036 286.96